LOCUS AEE86131.1 730 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nuclear poly(a) polymerase protein.
ACCESSION CP002687-6047
PROTEIN_ID AEE86131.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="nPAP"
/locus_tag="AT4G32850"
/gene_synonym="nuclear poly(a) polymerase"
/gene_synonym="PAP(IV)"
/gene_synonym="PAPS4"
/gene_synonym="poly(A) polymerase 4"
/gene_synonym="poly(A) polymerase IV"
/inference="Similar to RNA sequence,
EST:INSD:EL261043.1,INSD:F15342.1,INSD:ES106588.1,
INSD:AA712112.1,INSD:BP616555.1,INSD:CD532230.1,
INSD:BP601099.1,INSD:EL114304.1,INSD:ES206724.1,
INSD:ES018702.1,INSD:BP828889.1,INSD:BP806332.1,
INSD:ES138797.1,INSD:BP842065.1,INSD:ES092673.1,
INSD:AV826986.1,INSD:BX835218.1,INSD:EL969520.1,
INSD:BP808824.1,INSD:EH952881.1,INSD:ES116454.1,
INSD:EG449686.1,INSD:EL250824.1,INSD:EH987244.1,
INSD:AV551355.1,INSD:BP845364.1,INSD:EL027889.1,
INSD:EL983358.1,INSD:EL269008.1,INSD:EH931464.1,
INSD:ES013235.1,INSD:BP809844.1,INSD:EL172090.1,
INSD:ES058303.1,INSD:ES060553.1,INSD:ES094511.1,
INSD:EH835096.1,INSD:BX838683.1,INSD:EL999365.1"
/note="nuclear poly(a) polymerase (nPAP); CONTAINS
InterPro DOMAIN/s: Poly(A) polymerase
(InterPro:IPR014492), Poly(A) polymerase, central domain
(InterPro:IPR007012), Nucleotidyltransferase, class I,
C-terminal-like (InterPro:IPR011068), Nucleotidyl
transferase domain (InterPro:IPR002934), Poly(A)
polymerase, RNA-binding domain (InterPro:IPR007010); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="TAIR:AT4G32850"
/db_xref="Araport:AT4G32850"
intron_pos 46:0 (1/10)
intron_pos 72:0 (2/10)
intron_pos 108:0 (3/10)
intron_pos 129:0 (4/10)
intron_pos 183:0 (5/10)
intron_pos 221:0 (6/10)
intron_pos 242:0 (7/10)
intron_pos 352:0 (8/10)
intron_pos 407:0 (9/10)
intron_pos 685:0 (10/10)
BEGIN
1 MMVGTQNLGG SLPPLNSPKS YGITKPLSLA GPSSADIKRN VELEKYLVDE GLYESKDDTM
61 RREEVLGRID QIVKHWVKQL TQQRGYTDQM VEDANAVIFT FGSYRLGVHG PGADIDTLCV
121 GPSYVNREED FFIILHDILA EMEEVTELHP VPDAHVPVMK FKFQGIPIDL LYASISLLVV
181 PQDLDISSSS VLCEVDEPTV RSLNGCRVAD QILKLVPNFE HFRTTLRCLK YWAKKRGVYS
241 NVTGFLGGVN WALLVARVCQ LYPNAIPSML VSRFFRVYTQ WRWPNPVMLC AIEEDELGFP
301 VWDRRKNHRD RYHLMPIITP AYPCMNSSYN VSQSTLRVMT EQFQFGNNIL QEIELNKQHW
361 SSLFEQYMFF EAYKNYLQVD IVAADAEDLL AWKGWVESRF RQLTLKIERD TNGMLMCHPQ
421 PNEYVDTARQ FLHCAFFMGL QRAEGVGGQE CQQFDIRGTV DEFRQEVNMY MFWKPGMDVF
481 VSHVRRRQLP PFVFPNGYRR PRQSRHQNLP GGKSGEDGSV SHSGSVVERH AKRKNDSEMM
541 DVRPEKPEKR ASLSPQSLDI VSPENSAITT GWTPPVCNLR RPPSEEIEAD NLNTECTELT
601 DLARNECNSG SEQVLEVDSM AVVQECSDPA EPLGKCVTPD SVDVVACVSG QEENLDRNLR
661 SVSISGTDSP LLPSRSCGQN RDYEGFGFPA ANSDPMGKKN LYSQSGMSED LQVIKLPHSS
721 YHKISSVENI
//