LOCUS AEE86105.1 2154 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana MUS308 and mammalian DNA polymerase-
like protein protein.
ACCESSION CP002687-6001
PROTEIN_ID AEE86105.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G32700"
/inference="Similar to RNA sequence,
EST:INSD:EG439508.1,INSD:ES118133.1,INSD:ES025298.1,
INSD:EH813771.1,INSD:T44382.1,INSD:EG439520.1,
INSD:EG439512.1,INSD:EG439522.1,INSD:EG439513.1,
INSD:ES062654.1,INSD:EG439509.1,INSD:ES090115.1,
INSD:BE530735.1,INSD:EL206206.1,INSD:AV546006.1,
INSD:ES125691.1"
/inference="Similar to RNA sequence, mRNA:INSD:AB192295.1"
/note="helicases;ATP-dependent helicases;nucleic acid
binding;ATP binding;DNA-directed DNA polymerases;DNA
binding; FUNCTIONS IN: in 6 functions; INVOLVED IN:
regulation of gene expression, DNA replication, DNA
recombination, photomorphogenesis; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: petal differentiation and
expansion stage, E expanded cotyledon stage, D bilateral
stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase,
DEAD/DEAH box type, N-terminal (InterPro:IPR011545),
DEAD-like helicase, N-terminal (InterPro:IPR014001),
DNA-directed DNA polymerase, family A, palm domain
(InterPro:IPR001098), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), DNA polymerase A domain
(InterPro:IPR002298), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
thaliana protein match is: U5 small nuclear
ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628
Blast hits to 16579 proteins in 2941 species: Archae -
600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants
- 590; Viruses - 412; Other Eukaryotes - 6075 (source:
NCBI BLink)."
/db_xref="TAIR:AT4G32700"
/db_xref="Araport:AT4G32700"
intron_pos 13:0 (1/25)
intron_pos 155:2 (2/25)
intron_pos 233:0 (3/25)
intron_pos 520:0 (4/25)
intron_pos 541:2 (5/25)
intron_pos 577:0 (6/25)
intron_pos 644:0 (7/25)
intron_pos 711:0 (8/25)
intron_pos 765:0 (9/25)
intron_pos 845:0 (10/25)
intron_pos 916:0 (11/25)
intron_pos 1033:0 (12/25)
intron_pos 1084:0 (13/25)
intron_pos 1158:0 (14/25)
intron_pos 1231:0 (15/25)
intron_pos 1270:1 (16/25)
intron_pos 1648:0 (17/25)
intron_pos 1714:0 (18/25)
intron_pos 1800:2 (19/25)
intron_pos 1864:0 (20/25)
intron_pos 1900:0 (21/25)
intron_pos 2017:2 (22/25)
intron_pos 2054:0 (23/25)
intron_pos 2101:0 (24/25)
intron_pos 2133:1 (25/25)
BEGIN
1 MDSDSSKSRI DQFYVSKKRK HQSPNLKSGR NEKNVKVTGE RSPGDKGTLD SYLKASLDDK
61 STTNSGLQAR QEAFTRKLDL EVSASSVGQN IHPCLPKPVS FATFKECLGQ NGSQDLHKEG
121 VAAETHATDG LLCANQKDNS ELRDFATSFL SLYCSGVQSV VGSPPHQKEN ELKRRSSSSS
181 LAQDIQISHK RRCESENIPS LDDLTNPLGS KPESLARNGN NRDKPVSDPT KKMPSNESVE
241 IPMGLRKCSK APESSAHLTE FHTPGSAIKS CPVGTPKSGC GSSMFSPGEA FWNEAIQVAD
301 GLTIPIENFG SVEAKVRDQH VTILSCSKKT DKCTEKLERS LDLDEIRVKD KDAIGFSKVV
361 EKHGRDFNKE VYQLPVKNLE LLFQDKNING GIQERCASFD QNNITLGSSR ISESAFVGNK
421 GCENLDIANN AQADKGLIGK MYPEPEGKKV LLCEENRGVR SVSMISNMRK PVGSSESEES
481 HTPSSSHRNY DGLSLSTWLP SEVCSVYNKK GISKLYPWQV ECLQVDGVLQ KRNLVYCAST
541 SAGKSFVAEV LMLRRVIRTG KMALLVLPYV SICAEKAEHL EVLLEPLGKH VRSYYGNQGG
601 GTLPKDTSVA VCTIEKANSL INRLLEEGRL SELGIIVIDE LHMVGDQHRG YLLELMLTKL
661 RYAAGEGSSE SSSGESSGTS SGKADPAHGL QIVGMSATMP NVGAVADWLQ AALYQTEFRP
721 VPLEEYIKVG STIYNKKMEV VRTIPKAADM GGKDPDHIVE LCNEVVQEGN SVLIFCSSRK
781 GCESTARHIS KLIKNVPVNV DGENSEFMDI RSAIDALRRS PSGVDPVLEE TLPSGVAYHH
841 AGLTVEEREI VETCYRKGLV RVLTATSTLA AGVNLPARRV IFRQPMIGRD FIDGTRYKQM
901 SGRAGRTGID TKGDSVLICK PGELKRIMAL LNETCPPLQS CLSEDKNGMT HAILEVVAGG
961 IVQTAKDIHR YVRCTLLNST KPFQDVVKSA QDSLRWLCHR KFLEWNEETK LYTTTPLGRG
1021 SFGSSLCPEE SLIVLDDLLR AREGLVMASD LHLVYLVTPI NVGVEPNWEL YYERFMELSP
1081 LEQSVGNRVG VVEPFLMRMA HGATVRTLNR PQDVKKNLRG EYDSRHGSTS MKMLSDEQML
1141 RVCKRFFVAL ILSKLVQEAS VTEVCEAFKV ARGMVQALQE NAGRFSSMVS VFCERLGWHD
1201 LEGLVAKFQN RVSFGVRAEI VELTSIPYIK GSRARALYKA GLRTSQAIAE ASIPEIVKAL
1261 FESSAWAAEG TGQRRIHLGL AKKIKNGARK IVLEKAEEAR AAAFSAFKSL GLDVNELSKP
1321 LPLAPASSLN GQETTERDIS RGSVGPDGLQ QSIEGHMECE NFDMDNHREK PSEVLGDATL
1381 GVSSEINLTS RLPNFRPIGT AVGTNGPSAV SILSSDTFPI PVYDNREIKP KDNVEQHLTR
1441 NDHIPLSSNK DGTGEKGPVT AGNISGGFDS FLELWGSAGE FFFDLHYNKL QDLNSRISYE
1501 IHGIAICWNC SPVYYVNLNK DLPNLECVEK QKLIEDAVIG KSEVLASHNM LDVIKSRWNK
1561 ISKIMGNVNT RKFTWNLKVQ IQVLKSPAIS IQRCTRLNLP EGIRDELVDG SWLMMPPLHT
1621 SHTIDMSIVI WILWPDEERH SNPNIDKEVK KRLSPEAAEA ANRSGRWRNQ IRRVAHNGCC
1681 RRVAQTRALC SALWKILVSE ELLQALTTIE MPLVNVLADM ELWGIGIDIE GCLRARNILR
1741 DKLRSLEKKA FELAGMTFSL HNPADIANVL FGQLKLPIPE NQSKGKLHPS TDKHCLDLLR
1801 NEHPVVPIIK EHRTLAKLLN CTLGSICSLA KLRLSTQRYT LHGRWLQTST ATGRLSIEEP
1861 NLQSVEHEVE FKLDKNGRDV SSDADRYKIN ARDFFVPTQE NWLLLTADYS QIELRLMAHF
1921 SRDSSLISKL SQPEGDVFTM IAAKWTGKAE DSVSPHDRDQ TKRLIYGILY GMGANRLAEQ
1981 LECTSDEAKE KIRSFKSSFP AVTSWLNETI SFCQEKGYIQ TLKGRRRFLS KIKFGNAKEK
2041 SKAQRQAVNS MCQGSAADII KIAMINIYSA IAEDVDTAAS SSSSETRFHM LKGRCRILLQ
2101 VHDELVLEVD PSYVKLAAML LQTSMENAVS LLVPLHVKLK VGKTWGSLEP FQTD
//