LOCUS AEE86102.1 860 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily
protein protein.
ACCESSION CP002687-5998
PROTEIN_ID AEE86102.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G32670"
/gene_synonym="F4D11.130"
/gene_synonym="F4D11_130"
/inference="Similar to RNA sequence,
EST:INSD:EG469233.1,INSD:BP656497.1,INSD:EG469242.1,
INSD:EG469222.1,INSD:BP615741.1,INSD:EG469241.1,
INSD:BP627847.1,INSD:BP651867.1,INSD:EH801991.1,
INSD:EG469243.1,INSD:EG469224.1,INSD:EG469240.1,
INSD:EG469248.1,INSD:BP783070.1,INSD:EL998880.1,
INSD:BP781107.1,INSD:EG469244.1,INSD:BP610615.1,
INSD:EG469229.1,INSD:EG469236.1,INSD:BE522047.1,
INSD:BP611530.1,INSD:EG469230.1,INSD:EL235813.1,
INSD:EG469232.1,INSD:EL168371.1,INSD:BP626180.1,
INSD:AU228822.1,INSD:EG469238.1,INSD:EG469234.1,
INSD:ES040459.1,INSD:EG469223.1,INSD:BP630922.1,
INSD:BP629267.1,INSD:EG469249.1,INSD:EG469227.1,
INSD:DR383472.1,INSD:BP608910.1,INSD:EG469235.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY735661.1"
/note="RING/FYVE/PHD zinc finger superfamily protein;
FUNCTIONS IN: zinc ion binding; EXPRESSED DURING: seedling
growth; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4
RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type
(InterPro:IPR011016); BEST Arabidopsis thaliana protein
match is: RING/U-box superfamily protein
(TAIR:AT4G34100.2); Has 2175 Blast hits to 1953 proteins
in 226 species: Archae - 0; Bacteria - 2; Metazoa - 1020;
Fungi - 225; Plants - 544; Viruses - 49; Other Eukaryotes
- 335 (source: NCBI BLink)."
/db_xref="TAIR:AT4G32670"
/db_xref="Araport:AT4G32670"
intron_pos 78:0 (1/8)
intron_pos 270:0 (2/8)
intron_pos 419:0 (3/8)
intron_pos 481:2 (4/8)
intron_pos 585:2 (5/8)
intron_pos 636:1 (6/8)
intron_pos 687:0 (7/8)
intron_pos 736:0 (8/8)
BEGIN
1 MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH
61 SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH EFLMGLLMRA LRFMNLILPW
121 ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL
181 LRRHPEFLRR MIILENGLKD RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA
241 LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301 HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV
361 LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL MGTLYLVSAL SCMELIQKIV
421 QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF
481 GVYEDEFVFG LLVAYMCLVI FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR
541 KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601 MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH
661 FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL MIIIPSQVPL GESPVYNLLH
721 DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS
781 LLFTLCVPYV VVNSLFPILG FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL
841 EFDNRYKVGE RLVDFTEDLE
//