LOCUS AEE86087.1 453 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana C3H4 type zinc finger protein protein.
ACCESSION CP002687-5977
PROTEIN_ID AEE86087.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G32600"
/gene_synonym="F4D11.200"
/gene_synonym="F4D11_200"
/inference="Similar to RNA sequence,
EST:INSD:EG525974.1,INSD:BX838616.1,INSD:BP607856.1,
INSD:AV557536.1,INSD:AV802225.1,INSD:EL102913.1,
INSD:EG483821.1,INSD:EL009864.1,INSD:BG459522.1,
INSD:F19899.1,INSD:ES104786.1,INSD:AV814503.1,
INSD:ES000899.1,INSD:DR369296.1,INSD:CD529343.1,
INSD:AA597818.1,INSD:DR354172.1,INSD:EH945677.1,
INSD:BP671616.1,INSD:BP782386.1,INSD:BX837270.1,
INSD:EG525973.1,INSD:AV825776.1,INSD:EL195110.1,
INSD:EL164657.1,INSD:DR383807.1,INSD:EL109981.1,
INSD:BP785603.1,INSD:EH939299.1,INSD:BP780624.1,
INSD:AV792364.1,INSD:EL172728.1,INSD:EG483818.1,
INSD:F19898.1,INSD:ES170980.1,INSD:EH856458.1,
INSD:EL170709.1,INSD:EL101278.1,INSD:BP821660.1,
INSD:AV817542.1,INSD:EG483817.1,INSD:BP789164.1,
INSD:EH806329.1,INSD:AV812987.1,INSD:BP807460.1,
INSD:EH814967.1,INSD:BP618722.1,INSD:EL287330.1,
INSD:EH988701.1,INSD:EL075236.1,INSD:AV546199.1,
INSD:EL973719.1,INSD:BP794629.1,INSD:AV830780.1,
INSD:EG483822.1,INSD:BX835181.1,INSD:CB185674.2,
INSD:AA712917.1,INSD:BP618691.1,INSD:BP618426.1,
INSD:AV526695.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY096655.1,INSD:BX828445.1,INSD:AY074271.1,
INSD:BX826956.1,INSD:AY081300.1,INSD:BX829299.1"
/note="zinc finger (C3HC4-type RING finger) family
protein; FUNCTIONS IN: protein binding, zinc ion binding;
LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Zinc finger, RING-type
(InterPro:IPR001841), Zinc finger, RING/FYVE/PHD-type
(InterPro:IPR013083); BEST Arabidopsis thaliana protein
match is: zinc finger (C3HC4-type RING finger) family
protein (TAIR:AT1G80400.1); Has 7180 Blast hits to 7160
proteins in 223 species: Archae - 0; Bacteria - 6; Metazoa
- 2398; Fungi - 545; Plants - 2870; Viruses - 33; Other
Eukaryotes - 1328 (source: NCBI BLink)."
/db_xref="TAIR:AT4G32600"
/db_xref="Araport:AT4G32600"
intron_pos 223:2 (1/3)
intron_pos 265:2 (2/3)
intron_pos 362:0 (3/3)
BEGIN
1 MGVSLLKQQH RITNQADTFS RFMERSPENN LSRNEHIIID IPRNAAIASS SSSHDRISNV
61 LEPLQHEEER PSTVSPMAAP QPATATASSS SSMRSNPRSV RRRRSPLNSG LWISIELFLT
121 VGQIIAAIVV LSLSKHEHPR APLFTWIVGY ACGCVATLPL LYWRYYHSNQ ASEQDSGQHR
181 PNLNVAAGPF AFSISRTSEA DGRQTNTTSS RGSRYPGFIS AARLKVIVEY FKMALDCFFA
241 VWFVVGNVWI FGGHSSAAEA PNLYRLCLVF LTFSCIGYAM PFILCTTICC CLPCIISILG
301 YREDLTQPRG ATPESINALP THKFKLKKSR SNGDDNGSST SEGGVVAAGT DNERAISGED
361 AVCCICLAKY ANNEELRELP CSHFFHKECV DKWLKINASC PLCKSEVGEK NSDLTSQGIL
421 TSLSSGENDN HQQQQQQQRS ELRVENGLAN NVI
//