LOCUS AEE86071.1 529 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana serine hydroxymethyltransferase 3 protein.
ACCESSION CP002687-5955
PROTEIN_ID AEE86071.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="SHM3"
/locus_tag="AT4G32520"
/gene_synonym="AtSHMT3"
/gene_synonym="L23H3.3"
/gene_synonym="serine hydroxymethyltransferase 3"
/gene_synonym="SERINE HYDROXYMETHYLTRANSFERASE 3"
/inference="Similar to RNA sequence,
EST:INSD:EH951069.1,INSD:AV519969.1,INSD:EL218272.1,
INSD:ES201245.1,INSD:ES192421.1,INSD:DR380122.1,
INSD:EL191586.1,INSD:EH836031.1,INSD:EL111684.1,
INSD:DR281115.1,INSD:EL041561.1,INSD:ES029909.1,
INSD:DR281117.1,INSD:DR281118.1,INSD:EL329130.1,
INSD:EL072320.1,INSD:EH970133.1,INSD:BP670057.1,
INSD:BP842305.1,INSD:EH846135.1,INSD:ES172683.1,
INSD:DR257249.1,INSD:CF774427.1,INSD:DR257248.1,
INSD:ES132825.1,INSD:DR281109.1,INSD:BP561034.1,
INSD:BP613738.1,INSD:EL093877.1,INSD:EL996286.1,
INSD:DR281121.1,INSD:DR281114.1,INSD:BP634201.1,
INSD:BU635483.1,INSD:DR281108.1,INSD:CB262484.1,
INSD:DR281113.1,INSD:DR194581.1,INSD:ES060554.1,
INSD:DR194582.1,INSD:EL246182.1,INSD:DR372617.1,
INSD:ES181398.1,INSD:DR281120.1,INSD:AV784529.1,
INSD:ES087660.1,INSD:ES149219.1,INSD:AV530878.1,
INSD:EL252505.1,INSD:EH967409.1,INSD:ES177340.1,
INSD:EL974646.1,INSD:DR281110.1,INSD:ES075073.1,
INSD:EL129807.1,INSD:EL145527.1,INSD:BP617300.1,
INSD:EH827217.1,INSD:BP614723.1,INSD:CB257379.1,
INSD:AV782823.1,INSD:BP846247.1,INSD:AV796180.1,
INSD:AV533150.1,INSD:EL996006.1,INSD:CB262286.1,
INSD:EL264061.1,INSD:EL331117.1,INSD:EL141134.1,
INSD:EL129030.1,INSD:ES035242.1,INSD:DR257250.1,
INSD:DR281116.1,INSD:EL210078.1,INSD:ES168472.1,
INSD:EL967221.1,INSD:CB256003.1,INSD:EH837394.1,
INSD:BP868985.1,INSD:DR281112.1,INSD:DR281111.1,
INSD:DR281107.1,INSD:AV531090.1,INSD:EL204217.1,
INSD:EL187343.1,INSD:ES120323.1,INSD:ES175961.1,
INSD:BP842147.1,INSD:ES051179.1,INSD:DR281119.1,
INSD:AV822152.1,INSD:AV521807.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF375450.1,INSD:BT000641.1"
/note="serine hydroxymethyltransferase 3 (SHM3); FUNCTIONS
IN: glycine hydroxymethyltransferase activity; INVOLVED
IN: glycine metabolic process, L-serine metabolic process;
LOCATED IN: chloroplast, plastid; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: Pyridoxal phosphate-dependent
transferase, major domain (InterPro:IPR015424), Serine
hydroxymethyltransferase, pyridoxal phosphate binding site
(InterPro:IPR019798), Pyridoxal phosphate-dependent
transferase, major region, subdomain 1
(InterPro:IPR015421), Serine hydroxymethyltransferase
(InterPro:IPR001085); BEST Arabidopsis thaliana protein
match is: serine transhydroxymethyltransferase 1
(TAIR:AT4G37930.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G32520"
/db_xref="Araport:AT4G32520"
intron_pos 73:1 (1/10)
intron_pos 138:2 (2/10)
intron_pos 197:0 (3/10)
intron_pos 236:1 (4/10)
intron_pos 274:0 (5/10)
intron_pos 315:0 (6/10)
intron_pos 350:0 (7/10)
intron_pos 379:0 (8/10)
intron_pos 415:0 (9/10)
intron_pos 439:1 (10/10)
BEGIN
1 MQACCGGNSM ASLQQPGRVQ GSVFPPIMPP VTKFSQQLKF NISKPFRSSF LKRNLVSEMR
61 ASSVSLPNVE ISSKEIPFED YGLGEVDPEV RTIITKEKDR QFRSLELIAS ENFTSRAVME
121 AVGSCLTNKY SEGLPGKRYY GGNEYIDQLE TLCQNRALAA FRLDSTKWGV NVQPLSGSPA
181 NFAVYTAILS PHDRIMGLDL PHGGHLSHGF MTAKRRVSGT SIYFESMPYR LDESTGIVDY
241 DMLEKTATLF RPKLIIAGAS AYSRDFDYPR MRKIADSVGA FLMMDMAHIS GLVAASVVAD
301 PFEYCDIVTT TTHKSLRGPR GGMIFFRKDP INGVDLESAV NNAVFPGLQG GPHNHTIGGL
361 AVCLKHAQSP EFKAYQKRVV SNCRALANRL VELGFKLVSG GSDNHLVLVD LRPMGMDGAR
421 VEKILDMASI TLNKNSVPGD KSALVPGGIR IGSPAMTTRG LSEKDFVVVA DFIKEGVEIT
481 MEAKKAAPGS KLQDFNKFVT SPEFPLKERV KSLKERVETF TSRFPIPGV
//