LOCUS AEE86064.1 365 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana choice-of-anchor C domain protein,
putative (Protein of unknown function, DUF642) protein.
ACCESSION CP002687-5945
PROTEIN_ID AEE86064.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G32460"
/gene_synonym="F8B4.160"
/gene_synonym="F8B4_160"
/inference="Similar to RNA sequence,
EST:INSD:Z18147.1,INSD:ES184034.1,INSD:Z34535.1,
INSD:DR235658.1,INSD:DR235654.1,INSD:DR235649.1,
INSD:EH937272.1,INSD:DR235662.1,INSD:DR235663.1,
INSD:DR230943.1,INSD:EL106888.1,INSD:DR235645.1,
INSD:BP829605.1,INSD:DR235648.1,INSD:R30487.1,
INSD:DR235640.1,INSD:BX839257.1,INSD:DR235644.1,
INSD:DR235667.1,INSD:AV550315.1,INSD:DR235660.1,
INSD:AV821984.1,INSD:DR235664.1,INSD:DR235657.1,
INSD:ES122369.1,INSD:DR235653.1,INSD:DR235656.1,
INSD:AV533684.1,INSD:CA781351.1,INSD:EL123048.1,
INSD:DR235668.1,INSD:ES065765.1,INSD:CK121381.1,
INSD:DR235646.1,INSD:DR235643.1,INSD:EL323127.1,
INSD:DR235636.1,INSD:BP819453.1,INSD:EL251648.1,
INSD:ES011734.1,INSD:DR235665.1,INSD:DR235650.1,
INSD:Z18131.1,INSD:BP860866.1,INSD:BP826699.1,
INSD:DR235634.1,INSD:DR235635.1,INSD:DR235637.1,
INSD:DR235639.1,INSD:DR235651.1,INSD:DR235647.1,
INSD:EH835776.1,INSD:DR235642.1,INSD:DR235659.1,
INSD:T76314.1,INSD:DR235638.1,INSD:T88617.1,
INSD:BP833297.1,INSD:ES093721.1,INSD:BP842370.1,
INSD:DR235655.1,INSD:DR235666.1,INSD:EL143083.1,
INSD:DR235661.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT025248.1"
/note="FUNCTIONS IN: molecular_function unknown; INVOLVED
IN: biological_process unknown; LOCATED IN: plant-type
cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF642 (InterPro:IPR006946),
Galactose-binding domain-like (InterPro:IPR008979); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function, DUF642 (TAIR:AT5G11420.1); Has 35333 Blast hits
to 34131 proteins in 2444 species: Archae - 798; Bacteria
- 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT4G32460"
/db_xref="Araport:AT4G32460"
intron_pos 25:1 (1/2)
intron_pos 191:1 (2/2)
BEGIN
1 MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF
61 VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK GSYYSITFSA ARTCAQDERL
121 NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM
181 RALFPPRPTN KNILKNGGFE EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI
241 DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301 KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL
361 SARRP
//