LOCUS AEE85977.1 1161 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana chromatin remodeling factor protein.
ACCESSION CP002687-5833
PROTEIN_ID AEE85977.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PKR2"
/locus_tag="AT4G31900"
/gene_synonym="CHR7"
/gene_synonym="chromatin remodeling 7"
/gene_synonym="F11C18.100"
/gene_synonym="F11C18_100"
/gene_synonym="PICKLE RELATED 2"
/note="PICKLE RELATED 2 (PKR2); FUNCTIONS IN: in 6
functions; INVOLVED IN: chromatin assembly or disassembly;
LOCATED IN: chromatin, nucleus; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1087
(InterPro:IPR009463), DEAD-like helicase, N-terminal
(InterPro:IPR014001), Protein of unknown function DUF1086
(InterPro:IPR009462), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021), Chromo domain
(InterPro:IPR000953), SNF2-related (InterPro:IPR000330);
BEST Arabidopsis thaliana protein match is: chromatin
remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1)."
/db_xref="TAIR:AT4G31900"
/db_xref="Araport:AT4G31900"
intron_pos 41:0 (1/29)
intron_pos 53:1 (2/29)
intron_pos 76:2 (3/29)
intron_pos 110:2 (4/29)
intron_pos 182:1 (5/29)
intron_pos 214:1 (6/29)
intron_pos 260:0 (7/29)
intron_pos 313:0 (8/29)
intron_pos 349:0 (9/29)
intron_pos 366:0 (10/29)
intron_pos 395:1 (11/29)
intron_pos 444:0 (12/29)
intron_pos 476:2 (13/29)
intron_pos 523:0 (14/29)
intron_pos 579:2 (15/29)
intron_pos 602:0 (16/29)
intron_pos 640:0 (17/29)
intron_pos 676:2 (18/29)
intron_pos 704:0 (19/29)
intron_pos 769:0 (20/29)
intron_pos 828:1 (21/29)
intron_pos 862:2 (22/29)
intron_pos 887:2 (23/29)
intron_pos 909:1 (24/29)
intron_pos 943:0 (25/29)
intron_pos 985:2 (26/29)
intron_pos 1046:0 (27/29)
intron_pos 1076:1 (28/29)
intron_pos 1101:0 (29/29)
BEGIN
1 MANLLQRLRR RTGPKPDYIE DKLDEYIREE QVEETGGSNQ DCPLGEIEKI LDPICDIVLY
61 LIKHVDYYVF VASLVWFNAA MDVFIAENGA HEFIAIRPEW KTVDRIIACR EGDDGEEYLV
121 KYKELSYRNS YWESESDISD FQNEIQRFKD INSSSRRDKY VENERNREEF KQFDLTPEFL
181 TGTLHTYQLE GLNFLRYSWS KKTNVILADE MGLGKTIQSI AFLASLFEEN LSPHLVVAPL
241 STIRNWEREF ATWAPHMNVV MYTGDSEARD VIWEHEFYFS EGRKSKFDVL LTTYEMVHPG
301 ISVLSPIKWT CMIIDEGHRL KNQKSKLYSS LSQFTSKHIV LLTGTPLQNN LNELFALMHF
361 LDADKFGSLE KFQDINKEEQ ISRLHQMLAP HLLRRLKKDV LKDKVPPKKE LILRVDMSSQ
421 QKEVYKAVIT NNYQVLTKKR DAKISNVLMK LRQVCSHPYL LPDFEPRFED ANEAFTKLLE
481 ASGKLQLLDK MMVKLKEQGH RVLIYTQFQH TLYLLEDYFT FKNWNYERID GKISGPERQV
541 RIDRFNAENS NRFCFLLSTR AGGIGINLAT ADTVIIYDSD WNPHADLQAM ARVHRLGQTN
601 KVMIYRLIHK GTVEERMMEI TKNKMLLEHL VVGKQHLCQD ELDDIIKYGS KELFSEENDE
661 AGRSGKIHYD DAAIEQLLDR NHVDAVEVSL DDEEETDFLK NFKVASFEYV DDENEAAALE
721 EAQAIENNSS VRNADRTSHW KDLLKDKYEV QQAEELSALG KRKRNGKQVM YAEDDLDGLE
781 EISDEEDEYC LDDLKVTSDE EEEADEPEAA RQRKPRTVTR PYRKRARDNS EEIPLMEGEG
841 RYLMVLGFNE TERDIFLRTF KRYGAGNFDW KEFVNPLYMK TYDEINKYGI LFLKHIAENP
901 TDNSTNFKVI TAMVYADGVP KEGISSDELL VSMTFMMLVK EKCQFLDNHP TAPVFSNYVI
961 SKYNLRNGAF SKEEHDRILI PAVSKHGYGR WVAIVEDEEI GFQEVACKDL NIPFPPDTKS
1021 ARKRICDHVG KRVKKMEDAI KYEYAEKILA EQAKAETKGT SFVDAEKEML KNDPITSKKN
1081 SATAVDNKQG RVEMAQSYDQ SVNEKSGESF QTYLDIQPLN RMPRESFKPL EPINEEISTR
1141 LSVGTDHDVE MDAADNIIVL D
//