LOCUS AEE85976.1 1202 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana chromatin remodeling factor protein.
ACCESSION CP002687-5831
PROTEIN_ID AEE85976.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PKR2"
/locus_tag="AT4G31900"
/gene_synonym="CHR7"
/gene_synonym="chromatin remodeling 7"
/gene_synonym="F11C18.100"
/gene_synonym="F11C18_100"
/gene_synonym="PICKLE RELATED 2"
/note="PICKLE RELATED 2 (PKR2); FUNCTIONS IN: in 6
functions; INVOLVED IN: chromatin assembly or disassembly;
LOCATED IN: chromatin, nucleus; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1087
(InterPro:IPR009463), Protein of unknown function DUF1086
(InterPro:IPR009462), Chromo domain (InterPro:IPR000953),
SNF2-related (InterPro:IPR000330), DEAD-like helicase,
N-terminal (InterPro:IPR014001), Chromo domain-like
(InterPro:IPR016197), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
thaliana protein match is: chromatin remodeling factor
CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 19383 Blast hits to
16625 proteins in 2121 species: Archae - 158; Bacteria -
5872; Metazoa - 3841; Fungi - 4162; Plants - 1629; Viruses
- 186; Other Eukaryotes - 3535 (source: NCBI BLink)."
/db_xref="TAIR:AT4G31900"
/db_xref="Araport:AT4G31900"
intron_pos 41:0 (1/28)
intron_pos 93:2 (2/28)
intron_pos 151:2 (3/28)
intron_pos 223:1 (4/28)
intron_pos 255:1 (5/28)
intron_pos 301:0 (6/28)
intron_pos 354:0 (7/28)
intron_pos 390:0 (8/28)
intron_pos 407:0 (9/28)
intron_pos 436:1 (10/28)
intron_pos 485:0 (11/28)
intron_pos 517:2 (12/28)
intron_pos 564:0 (13/28)
intron_pos 620:2 (14/28)
intron_pos 643:0 (15/28)
intron_pos 681:0 (16/28)
intron_pos 717:2 (17/28)
intron_pos 745:0 (18/28)
intron_pos 810:0 (19/28)
intron_pos 869:1 (20/28)
intron_pos 903:2 (21/28)
intron_pos 928:2 (22/28)
intron_pos 950:1 (23/28)
intron_pos 984:0 (24/28)
intron_pos 1026:2 (25/28)
intron_pos 1087:0 (26/28)
intron_pos 1117:1 (27/28)
intron_pos 1142:0 (28/28)
BEGIN
1 MANLLQRLRR RTGPKPDYIE DKLDEYIREE QVEETGGSNQ DCPLGEIEKI LDREWRPTAS
61 NNPNSSDNGT PTLVVVKQYL VKWKGLSYLH CSWVPEQEFE KAYKSHPHLK LKLRVTRFNA
121 AMDVFIAENG AHEFIAIRPE WKTVDRIIAC REGDDGEEYL VKYKELSYRN SYWESESDIS
181 DFQNEIQRFK DINSSSRRDK YVENERNREE FKQFDLTPEF LTGTLHTYQL EGLNFLRYSW
241 SKKTNVILAD EMGLGKTIQS IAFLASLFEE NLSPHLVVAP LSTIRNWERE FATWAPHMNV
301 VMYTGDSEAR DVIWEHEFYF SEGRKSKFDV LLTTYEMVHP GISVLSPIKW TCMIIDEGHR
361 LKNQKSKLYS SLSQFTSKHI VLLTGTPLQN NLNELFALMH FLDADKFGSL EKFQDINKEE
421 QISRLHQMLA PHLLRRLKKD VLKDKVPPKK ELILRVDMSS QQKEVYKAVI TNNYQVLTKK
481 RDAKISNVLM KLRQVCSHPY LLPDFEPRFE DANEAFTKLL EASGKLQLLD KMMVKLKEQG
541 HRVLIYTQFQ HTLYLLEDYF TFKNWNYERI DGKISGPERQ VRIDRFNAEN SNRFCFLLST
601 RAGGIGINLA TADTVIIYDS DWNPHADLQA MARVHRLGQT NKVMIYRLIH KGTVEERMME
661 ITKNKMLLEH LVVGKQHLCQ DELDDIIKYG SKELFSEEND EAGRSGKIHY DDAAIEQLLD
721 RNHVDAVEVS LDDEEETDFL KNFKVASFEY VDDENEAAAL EEAQAIENNS SVRNADRTSH
781 WKDLLKDKYE VQQAEELSAL GKRKRNGKQV MYAEDDLDGL EEISDEEDEY CLDDLKVTSD
841 EEEEADEPEA ARQRKPRTVT RPYRKRARDN SEEIPLMEGE GRYLMVLGFN ETERDIFLRT
901 FKRYGAGNFD WKEFVNPLYM KTYDEINKYG ILFLKHIAEN PTDNSTNFKV ITAMVYADGV
961 PKEGISSDEL LVSMTFMMLV KEKCQFLDNH PTAPVFSNYV ISKYNLRNGA FSKEEHDRIL
1021 IPAVSKHGYG RWVAIVEDEE IGFQEVACKD LNIPFPPDTK SARKRICDHV GKRVKKMEDA
1081 IKYEYAEKIL AEQAKAETKG TSFVDAEKEM LKNDPITSKK NSATAVDNKQ GRVEMAQSYD
1141 QSVNEKSGES FQTYLDIQPL NRMPRESFKP LEPINEEIST RLSVGTDHDV EMDAADNIIV
1201 LD
//