LOCUS AEE85963.1 409 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ATP-dependent caseinolytic (Clp)
protease/crotonase family protein protein.
ACCESSION CP002687-5814
PROTEIN_ID AEE85963.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G31810"
/gene_synonym="F11C18.10"
/gene_synonym="F11C18_10"
/inference="Similar to RNA sequence,
EST:INSD:DR354588.1,INSD:EL308048.1,INSD:BP848368.1,
INSD:ES170539.1,INSD:EH958017.1,INSD:BP848454.1,
INSD:AV823582.1,INSD:BP624513.1,INSD:BP625679.1,
INSD:EL263751.1,INSD:EH954587.1,INSD:ES121817.1,
INSD:EL100558.1,INSD:AI998401.1,INSD:BP853550.1,
INSD:EH880739.1,INSD:ES178883.1,INSD:EL121222.1,
INSD:DR354587.1,INSD:ES100637.1,INSD:CB262206.1,
INSD:EL103291.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY080787.1,INSD:BX826710.1,INSD:AY114019.1"
/note="ATP-dependent caseinolytic (Clp) protease/crotonase
family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA
hydrolase activity, catalytic activity; INVOLVED IN: fatty
acid beta-oxidation, metabolic process; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST
Arabidopsis thaliana protein match is: ATP-dependent
caseinolytic (Clp) protease/crotonase family protein
(TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins
in 1880 species: Archae - 357; Bacteria - 15693; Metazoa -
1078; Fungi - 640; Plants - 575; Viruses - 0; Other
Eukaryotes - 4336 (source: NCBI BLink)."
/db_xref="TAIR:AT4G31810"
/db_xref="Araport:AT4G31810"
intron_pos 43:0 (1/13)
intron_pos 70:0 (2/13)
intron_pos 93:0 (3/13)
intron_pos 114:1 (4/13)
intron_pos 141:0 (5/13)
intron_pos 169:0 (6/13)
intron_pos 197:1 (7/13)
intron_pos 226:0 (8/13)
intron_pos 266:2 (9/13)
intron_pos 287:0 (10/13)
intron_pos 320:0 (11/13)
intron_pos 354:0 (12/13)
intron_pos 368:0 (13/13)
BEGIN
1 MQTVKALRRV SEPLQWVRSV SYGRRFSALP NYSASDADFE DQVLVEGKAK SRAAILNNPS
61 SLNALSAPMV GRLKRLYESW EENPAISFVL MKGSGKTFCS GADVLSLYHS INEGNTEESK
121 LFFENLYKFV YLQGTYLKPN IAIMDGVTMG CGGGISLPGM FRVATDKTVL AHPEVQIGFH
181 PDAGASYYLS RLPGYLGEYL ALTGQKLNGV EMIACGLATH YCLNARLPLI EERIGKLLTD
241 DPAVIEDSLA QYGDLVYPDS SSVLHKIELI DKYFGLDTVE EIIEAMENEA ANSCNEWCKK
301 TLKQIKEASP LSLKITLQSI REGRFQTLDQ CLTHEYRISI CGVSKVVSGD FCEGIRARLV
361 DKDFAPKWDP PRLEDVSKDM VDCYFTPASE LDDSDSELKL PTAQREPYF
//