LOCUS AEE85950.1 134 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TBP-associated factor II 15 protein.
ACCESSION CP002687-5796
PROTEIN_ID AEE85950.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="TAFII15"
/locus_tag="AT4G31720"
/gene_synonym="F28M20.90"
/gene_synonym="F28M20_90"
/gene_synonym="SALT TOLERANCE DURING GERMINATION 1"
/gene_synonym="STG1"
/gene_synonym="TAF10"
/gene_synonym="TBP-ASSOCIATED FACTOR 10"
/gene_synonym="TBP-associated factor II 15"
/inference="Similar to RNA sequence,
EST:INSD:BP791667.1,INSD:EH863463.1,INSD:ES011949.1,
INSD:EL204598.1,INSD:EH834449.1,INSD:ES134470.1,
INSD:ES077988.1,INSD:EH988667.1,INSD:EL255939.1,
INSD:EL169509.1,INSD:EL302456.1,INSD:EL329779.1,
INSD:DR751407.1,INSD:ES205071.1,INSD:EH841776.1,
INSD:ES044666.1,INSD:ES164495.1,INSD:ES166413.1,
INSD:DR374013.1,INSD:CB261652.1,INSD:DR751408.1,
INSD:ES001720.1,INSD:AU229888.1,INSD:EL285933.1,
INSD:ES154607.1,INSD:ES208364.1,INSD:EH859206.1,
INSD:ES137148.1,INSD:ES149096.1,INSD:ES151830.1,
INSD:EH917295.1,INSD:EL167640.1,INSD:EL139084.1,
INSD:EL177175.1,INSD:ES007342.1,INSD:EL156918.1,
INSD:EH813128.1,INSD:DR320321.1,INSD:BP868630.1,
INSD:ES188135.1,INSD:EL152092.1,INSD:EL995133.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT004724.1,INSD:AY086560.1,INSD:AF344879.1,
INSD:Y12904.1,INSD:AF352813.1,INSD:AY463628.1"
/note="TBP-associated factor II 15 (TAFII15); FUNCTIONS
IN: RNA polymerase II transcription factor activity,
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: transcription initiation; LOCATED
IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Transcription initiation factor TFIID, 23-30kDa subunit
(InterPro:IPR003923); Has 372 Blast hits to 372 proteins
in 163 species: Archae - 0; Bacteria - 0; Metazoa - 153;
Fungi - 132; Plants - 56; Viruses - 0; Other Eukaryotes -
31 (source: NCBI BLink)."
/db_xref="TAIR:AT4G31720"
/db_xref="Araport:AT4G31720"
intron_pos 32:0 (1/5)
intron_pos 53:2 (2/5)
intron_pos 74:2 (3/5)
intron_pos 92:0 (4/5)
intron_pos 109:0 (5/5)
BEGIN
1 MNHGQQSGEA KHEDDAALTE FLASLMDYTP TIPDDLVEHY LAKSGFQCPD VRLIRLVAVA
61 TQKFVADVAS DALQHCKARP APVVKDKKQQ KDKRLVLTME DLSKALREYG VNVKHPEYFA
121 DSPSTGMDPA TRDE
//