LOCUS AEE85931.1 200 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana serine/arginine-rich 22 protein.
ACCESSION CP002687-5769
PROTEIN_ID AEE85931.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RSZ22"
/locus_tag="AT4G31580"
/gene_synonym="At-RSZ22"
/gene_synonym="AtRSZ22"
/gene_synonym="F28M20.230"
/gene_synonym="F28M20_230"
/gene_synonym="RS-containing zinc finger protein 22"
/gene_synonym="RS-CONTAINING ZINC FINGER PROTEIN 22"
/gene_synonym="RSZP22"
/gene_synonym="serine/arginine-rich 22"
/gene_synonym="SRZ-22"
/gene_synonym="SRZ22"
/inference="Similar to RNA sequence,
EST:INSD:AV536029.1,INSD:ES164458.1,INSD:EG432586.1,
INSD:BP837018.1,INSD:AV557468.1,INSD:AV538352.1,
INSD:DR378481.1,INSD:BP666482.1,INSD:CK118031.1,
INSD:ES151826.1,INSD:BP825696.1,INSD:DR286877.1,
INSD:AI994955.1,INSD:ES205425.1,INSD:ES209101.1,
INSD:ES138230.1,INSD:T44141.1,INSD:EG461032.1,
INSD:DR286871.1,INSD:DR286885.1,INSD:EG461034.1,
INSD:DR286884.1,INSD:DR286890.1,INSD:EH956024.1,
INSD:EH850746.1,INSD:N65843.1,INSD:BP594941.1,
INSD:BP839902.1,INSD:BP598910.1,INSD:EG461027.1,
INSD:AV816694.1,INSD:DR286872.1,INSD:DR286882.1,
INSD:EG461030.1,INSD:DR286895.1,INSD:EG510565.1,
INSD:ES107756.1,INSD:EL161159.1,INSD:BP864381.1,
INSD:DR286875.1,INSD:DR751106.1,INSD:EG510566.1,
INSD:BP824790.1,INSD:EL305869.1,INSD:BP653591.1,
INSD:EL165155.1,INSD:DR286879.1,INSD:AV536024.1,
INSD:BP654847.1,INSD:AV550614.1,INSD:AV788863.1,
INSD:BP839530.1,INSD:DR286893.1,INSD:BP637330.1,
INSD:DR286889.1,INSD:EG432583.1,INSD:DR286881.1,
INSD:EH938155.1,INSD:BP650599.1,INSD:BP629938.1,
INSD:EH966349.1,INSD:BX834833.1,INSD:ES199144.1,
INSD:BP816668.1,INSD:DR286891.1,INSD:DR286896.1,
INSD:DR286883.1,INSD:BX837998.1,INSD:DR286894.1,
INSD:BP643532.1,INSD:AV824942.1,INSD:ES113084.1,
INSD:DR286887.1,INSD:EG461031.1,INSD:DR286880.1,
INSD:BP624915.1,INSD:CK121231.1,INSD:AI100460.1,
INSD:BP652765.1,INSD:BP848681.1,INSD:DR286873.1,
INSD:BP648163.1,INSD:BP847230.1,INSD:ES091824.1,
INSD:DR751129.1,INSD:BP601338.1,INSD:AV565374.1,
INSD:DR751130.1,INSD:DR286878.1,INSD:DR286886.1,
INSD:AV563440.1,INSD:DR286876.1,INSD:DR286892.1,
INSD:BP835213.1,INSD:BX837622.1,INSD:BX834512.1,
INSD:CK120910.1,INSD:DR373983.1,INSD:ES156891.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AJ002378.1,INSD:AY065387.1,INSD:AY117206.1,
INSD:AF033586.1,INSD:AY086525.1"
/note="serine/arginine-rich 22 (SRZ-22); FUNCTIONS IN:
protein binding; INVOLVED IN: nuclear mRNA splicing, via
spliceosome, RNA splicing; LOCATED IN: nuclear speck,
nucleolus, nucleus; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504), Nucleotide-binding, alpha-beta plait
(InterPro:IPR012677), Zinc finger, CCHC-type
(InterPro:IPR001878); BEST Arabidopsis thaliana protein
match is: RNA recognition motif and CCHC-type zinc finger
domains containing protein (TAIR:AT2G24590.1); Has 12597
Blast hits to 10987 proteins in 687 species: Archae - 4;
Bacteria - 845; Metazoa - 6508; Fungi - 1364; Plants -
2624; Viruses - 137; Other Eukaryotes - 1115 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G31580"
/db_xref="Araport:AT4G31580"
intron_pos 30:2 (1/4)
intron_pos 60:1 (2/4)
intron_pos 144:2 (3/4)
intron_pos 189:2 (4/4)
BEGIN
1 MSRVYVGNLD PRVTERELED EFRAFGVVRS VWVARRPPGY AFLDFEDPRD ARDAIRALDG
61 KNGWRVEQSH NRGERGGGGR GGDRGGGGGG RGGRGGSDLK CYECGETGHF ARECRNRGGT
121 GRRRSKSRSR TPPRYRRSPS YGRRSYSPRA RSPPPPRRRS PSPPPARGRS YSRSPPPYRA
181 REEVPYANGN GLKERRRSRS
//