LOCUS AEE85918.1 948 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Coatomer, beta subunit protein.
ACCESSION CP002687-5746
PROTEIN_ID AEE85918.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G31480"
/gene_synonym="F3L17.50"
/gene_synonym="F3L17_50"
/inference="Similar to RNA sequence,
EST:INSD:DR382387.1,INSD:AV818399.1,INSD:EL212104.1,
INSD:EH918720.1,INSD:EH879239.1,INSD:EH909175.1,
INSD:EL971992.1,INSD:ES140560.1,INSD:ES020855.1,
INSD:AV529142.1,INSD:EH892733.1,INSD:ES025006.1,
INSD:ES071312.1,INSD:EL111321.1,INSD:EH845191.1,
INSD:ES020345.1,INSD:EL293618.1,INSD:EH819192.1,
INSD:EL335510.1,INSD:AV541071.1,INSD:ES117103.1,
INSD:EL059229.1,INSD:EH960195.1,INSD:EL242374.1,
INSD:ES179837.1,INSD:EL129311.1,INSD:EL220239.1,
INSD:AV548453.1,INSD:ES116393.1,INSD:EL299802.1,
INSD:EL010872.1,INSD:EL213744.1,INSD:EL237171.1,
INSD:BX838172.1,INSD:EH974033.1,INSD:BE526148.1,
INSD:EL124195.1,INSD:AV562490.1,INSD:AV523461.1,
INSD:EL329034.1,INSD:ES014772.1,INSD:EL290058.1,
INSD:DR355019.1,INSD:EL062840.1,INSD:EH972465.1,
INSD:BE523693.1,INSD:AV547803.1,INSD:EL069285.1,
INSD:EL247379.1,INSD:EL239769.1,INSD:EH820233.1,
INSD:EH898072.1,INSD:ES068460.1,INSD:EL268128.1,
INSD:EH833104.1,INSD:AI998554.1,INSD:EH808876.1,
INSD:EL285772.1,INSD:EH840721.1,INSD:EH822675.1,
INSD:EL098767.1,INSD:EL967607.1,INSD:ES051063.1,
INSD:AV550541.1,INSD:EH918331.1,INSD:DR354565.1,
INSD:EH897274.1,INSD:EH882531.1,INSD:EH823270.1,
INSD:EL116917.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK221668.1"
/note="Coatomer, beta subunit; FUNCTIONS IN: clathrin
binding, structural molecule activity, binding; INVOLVED
IN: intracellular protein transport, vesicle-mediated
transport; LOCATED IN: membrane coat, COPI vesicle coat;
EXPRESSED IN: male gametophyte, guard cell; EXPRESSED
DURING: M germinated pollen stage; CONTAINS InterPro
DOMAIN/s: Coatomer, beta subunit, C-terminal
(InterPro:IPR011710), Armadillo-like helical
(InterPro:IPR011989), Coatomer, beta subunit
(InterPro:IPR016460), Armadillo-type fold
(InterPro:IPR016024), Clathrin/coatomer adaptor,
adaptin-like, N-terminal (InterPro:IPR002553); BEST
Arabidopsis thaliana protein match is: Coatomer, beta
subunit (TAIR:AT4G31490.1); Has 2798 Blast hits to 2724
proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa
- 1200; Fungi - 640; Plants - 392; Viruses - 0; Other
Eukaryotes - 566 (source: NCBI BLink)."
/db_xref="TAIR:AT4G31480"
/db_xref="Araport:AT4G31480"
intron_pos 683:0 (1/3)
intron_pos 853:0 (2/3)
intron_pos 881:2 (3/3)
BEGIN
1 MDKSSTMLVH YDKGTPAVAN EIKEALEGND VEAKVDAMKK AIMLLLNGET IPQLFITIIR
61 YVLPSEDHTI QKLLLLYLEL IEKTDSKGKV LPEMILICQN LRNNLQHPNE YIRGVTLRFL
121 CRMKETEIVE PLTPSVLQNL EHRHPFVRRN AILAIMSIYK LPQGDQLFVD APEMIEKVLS
181 TEQDPSAKRN AFLMLFTCAE ERAVNYLLSN VDKVSDWNES LQMVVLELIR SVCKTKPAEK
241 GKYIKIIISL LSATSSAVIY ECAGTLVSLS SAPTAIRAAA NTYCQLLLSQ SDNNVKLILL
301 DRLYELKTLH RDIMVELIID VLRALSSPNL DIRRKTLDIS LDLITHHNIN EVVQMLKKEV
361 VKTQSGELEK NGEYRQMLIQ AIHACAVKFP EVASTVVHLL MDFLGDSNVA SALDVVVFVR
421 EIIETNPKLR VSIITRLLDT FYQIRAGKVC PCALWIIGEY CLSLSEVESG ISTITQCLGE
481 LPFYSVSEES EPTETSKKIQ PTSSAMVSSR KPVILADGTY ATQSAASETT FSSPTVVQGS
541 LTSGNLRALL LTGDFFLGAV VACTLTKLVL RLEEVQSSKT EVNKTVTQAL LIMVSMLQLG
601 QSPVSPHPID NDSYERIVLC IKLLCHRNDE MKKIWLESCR QSFVKMISEK QLREMEELKA
661 KTQTTHAQPD DLIDFFHLKS RKGMSQLELE DQVQDDLKRA TGEFTKDEND ANKLNRILQL
721 TGFSDPVYAE AYVTVHHYDI ALEVTVINRT KETLQNLCLE LATMGDLKLV ERPQNYSLAP
781 ERSMQIKANI KVSSTETGVI FGNIVYETSN VMERNVVVLN DIHIDIMDYI SPAVCSEVAF
841 RTMWAEFEWE NKVAVNTTIQ NEREFLDHII KSTNMKCLTA PSAIEGECGF LAANLYAKSV
901 FGEDALVNVS IEKQTDGALS GYIRIRSKTQ GIALSLGDKI TLKQKGSS
//