LOCUS AEE85915.1 497 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002687-5736
PROTEIN_ID AEE85915.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G31450"
/gene_synonym="F3L17.20"
/gene_synonym="F3L17_20"
/inference="Similar to RNA sequence,
EST:INSD:BP850353.1,INSD:DR193125.1,INSD:ES001668.1,
INSD:ES017914.1,INSD:BP627932.1,INSD:AA597870.1,
INSD:DR193130.1,INSD:DR193133.1,INSD:ES186832.1,
INSD:AI992898.1,INSD:ES128554.1,INSD:DR370031.1,
INSD:EH832025.1,INSD:AV802984.1,INSD:DR193126.1,
INSD:BX839357.1,INSD:EL163298.1,INSD:DR193127.1,
INSD:DR193128.1,INSD:DR193132.1,INSD:AV824988.1,
INSD:BP668878.1,INSD:DR193124.1,INSD:DR193131.1,
INSD:EL265055.1,INSD:T20974.1,INSD:DR193122.1,
INSD:EL048898.1,INSD:DR193123.1,INSD:BP610955.1,
INSD:DR354554.1,INSD:EL301783.1,INSD:AI100547.1,
INSD:DR193129.1,INSD:CB255945.1,INSD:AV828830.1,
INSD:BX839349.1,INSD:EH822870.1,INSD:ES167402.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK226506.1,INSD:BT002300.1,INSD:BX828405.1,
INSD:AF424605.1,INSD:AY088181.1,INSD:BX827060.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc
finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana
protein match is: RING/U-box superfamily protein
(TAIR:AT5G24870.2); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G31450"
/db_xref="Araport:AT4G31450"
intron_pos 346:0 (1/4)
intron_pos 363:0 (2/4)
intron_pos 396:0 (3/4)
intron_pos 453:0 (4/4)
BEGIN
1 MDRWSSKRAM EARPDSKKKG GVVFRDRFNS NSCKVPICSD EKKSMNFTRF VGSSDKKEKS
61 VLSTYRSSPN GKEVIGTSSK ICISSSSSVK SGEKQPFSQI AIDSSESSRG SEDEVESEIL
121 QVPLGRDKRR MNNKLIYGKV ITPEAECSKL PSSSRIKRGF RQRFGLSKQE FHPGPSGQST
181 SANRGCSPLL SGVIPSGFGL DKRLSRKADT ISKTKVYGES SSSSSARGKN VTEPPPVEVR
241 RRSFNPRGSV SDSRRARHCI LDDDNDVASV GSQRLANRNN SRIRGSGRDG LSSVTAAEMS
301 QTETSNNLNS PVSLELFSGF PEFGLSGSLL SHDSFRSYNL DGISEILPEL DRIEQDIELN
361 YEDLLIMETG LLLGGLSFHD QHRDMRLDID NMSYEELLAL EERIGTVSTA LTEEAISKCL
421 KTSIYQMKPL SYGSITKSPS DNKEDAKCSI CQEEYTIGDE VGRLHCEHTY HVKCVQEWLR
481 IKSWCPICKA TAETSSK
//