LOCUS AEE85887.1 233 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana N-terminal nucleophile aminohydrolases
(Ntn hydrolases) superfamily protein protein.
ACCESSION CP002687-5698
PROTEIN_ID AEE85887.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PBA1"
/locus_tag="AT4G31300"
/gene_synonym="20S PROTEASOME SUBUNIT PBA1"
/gene_synonym="F8F16.120"
/gene_synonym="F8F16_120"
/inference="Similar to RNA sequence,
EST:INSD:AV554401.1,INSD:EL110345.1,INSD:ES167428.1,
INSD:EL247271.1,INSD:EG498904.1,INSD:Y09364.1,
INSD:F14474.1,INSD:BP828064.1,INSD:EH926091.1,
INSD:EG518426.1,INSD:EL047803.1,INSD:EL212292.1,
INSD:BP800161.1,INSD:DR216672.1,INSD:ES058024.1,
INSD:DR216679.1,INSD:BP656137.1,INSD:BP647902.1,
INSD:EL177545.1,INSD:AV551755.1,INSD:DR216674.1,
INSD:DR216675.1,INSD:EG518428.1,INSD:BP642075.1,
INSD:ES130953.1,INSD:ES215931.1,INSD:BP821180.1,
INSD:EH815769.1,INSD:EH857617.1,INSD:EH966091.1,
INSD:EG518439.1,INSD:EH978893.1,INSD:DR216683.1,
INSD:EL316088.1,INSD:ES196937.1,INSD:EL133487.1,
INSD:EG525911.1,INSD:DR216669.1,INSD:ES178144.1,
INSD:ES204376.1,INSD:DR216680.1,INSD:EL166813.1,
INSD:DR216678.1,INSD:EL975442.1,INSD:F14456.1,
INSD:AV539276.1,INSD:DR197174.1,INSD:BP856337.1,
INSD:BP613812.1,INSD:AV793700.1,INSD:DR216681.1,
INSD:EG518438.1,INSD:EH887854.1,INSD:ES157250.1,
INSD:AV441545.1,INSD:DR216670.1,INSD:EG518429.1,
INSD:EL977402.1,INSD:ES200773.1,INSD:EH978436.1,
INSD:EL081964.1,INSD:ES036871.1,INSD:EL240842.1,
INSD:EG518417.1,INSD:EL223835.1,INSD:EG525922.1,
INSD:BP651886.1,INSD:EH992621.1,INSD:ES089078.1,
INSD:EG488406.1,INSD:ES208642.1,INSD:DR216671.1,
INSD:BP638819.1,INSD:DR216686.1,INSD:BP820752.1,
INSD:EL974176.1,INSD:AV561308.1,INSD:AV826138.1,
INSD:DR216673.1,INSD:DR369989.1,INSD:EL003415.1,
INSD:AI994731.1,INSD:EL062345.1,INSD:EG518427.1,
INSD:DR216682.1,INSD:EH839236.1,INSD:EL290977.1,
INSD:EH885585.1,INSD:ES136079.1,INSD:ES109213.1,
INSD:BP665465.1,INSD:DR216677.1,INSD:ES088084.1,
INSD:EG518418.1,INSD:EL274262.1,INSD:CK121226.1,
INSD:EL179546.1,INSD:EL066178.1,INSD:EG466740.1,
INSD:BE662779.1,INSD:BP831865.1,INSD:BP621509.1,
INSD:DR216684.1,INSD:EG487217.1,INSD:EL235150.1,
INSD:ES146230.1,INSD:CB264366.1,INSD:BP652720.1,
INSD:EL154396.1,INSD:ES189524.1,INSD:BP633874.1,
INSD:AV553142.1,INSD:EL019217.1,INSD:ES127254.1,
INSD:ES193896.1,INSD:DR216676.1,INSD:EG487220.1,
INSD:BP814779.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY052354.1,INSD:BX828596.1,INSD:BX841537.1,
INSD:Y13694.1,INSD:BX841557.1,INSD:AF043529.1,
INSD:AY086241.1,INSD:AY058240.1,INSD:BX829148.1,
INSD:BX827364.1"
/note="PBA1; FUNCTIONS IN: peptidase activity,
endopeptidase activity, threonine-type endopeptidase
activity; INVOLVED IN: response to zinc ion, response to
salt stress, ubiquitin-dependent protein catabolic
process; LOCATED IN: proteasome core complex, proteasome
complex, plasma membrane, vacuole; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: Proteasome, beta-type subunit,
conserved site (InterPro:IPR016050), Peptidase T1A,
proteasome beta-subunit (InterPro:IPR000243), Proteasome,
subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis
thaliana protein match is: 20S proteasome beta subunit
PBB2 (TAIR:AT5G40580.2); Has 6974 Blast hits to 6974
proteins in 614 species: Archae - 864; Bacteria - 513;
Metazoa - 2325; Fungi - 1590; Plants - 711; Viruses - 0;
Other Eukaryotes - 971 (source: NCBI BLink)."
/db_xref="TAIR:AT4G31300"
/db_xref="Araport:AT4G31300"
intron_pos 35:1 (1/7)
intron_pos 61:0 (2/7)
intron_pos 79:2 (3/7)
intron_pos 104:0 (4/7)
intron_pos 141:1 (5/7)
intron_pos 166:0 (6/7)
intron_pos 191:0 (7/7)
BEGIN
1 MDLNLDAPHS MGTTIIGVTY NGGVVLGADS RTSTGMYVAN RASDKITQLT DNVYVCRSGS
61 AADSQVVSDY VRYFLHQHTI QHGQPATVKV SANLIRMLAY NNKNMLQTGL IVGGWDKYEG
121 GKIYGIPLGG TVVEQPFAIG GSGSSYLYGF FDQAWKDNMT KEEAEQLVVK AVSLAIARDG
181 ASGGVVRTVI INSEGVTRNF YPGDKLQLWH EELEPQNSLL DILNAAGPEP MAM
//