LOCUS AEE85775.2 312 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana autophagy 18 B-like protein protein.
ACCESSION CP002687-5534
PROTEIN_ID AEE85775.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="ATG18B"
/locus_tag="AT4G30510"
/gene_synonym="ARABIDOPSIS THALIANA HOMOLOG OF YEAST
AUTOPHAGY 18 (ATG18) B"
/gene_synonym="ATATG18B"
/gene_synonym="F17I23.150"
/gene_synonym="F17I23_150"
/gene_synonym="homolog of yeast autophagy 18 (ATG18) B"
/inference="Similar to RNA sequence,
EST:INSD:EH991627.1,INSD:EL096992.1,INSD:EH866597.1,
INSD:BX839079.1"
/note="ARABIDOPSIS THALIANA HOMOLOG OF YEAST AUTOPHAGY 18
(ATG18) B (ATATG18B); CONTAINS InterPro DOMAIN/s: WD40
repeat-like-containing domain (InterPro:IPR011046), WD40
repeat (InterPro:IPR001680), WD40/YVTN
repeat-like-containing domain (InterPro:IPR015943), WD40
repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis
thaliana protein match is: Transducin/WD40 repeat-like
superfamily protein (TAIR:AT3G62770.3); Has 1236 Blast
hits to 1191 proteins in 226 species: Archae - 0; Bacteria
- 2; Metazoa - 531; Fungi - 404; Plants - 152; Viruses -
2; Other Eukaryotes - 145 (source: NCBI BLink)."
/db_xref="TAIR:AT4G30510"
/db_xref="Araport:AT4G30510"
intron_pos 17:0 (1/8)
intron_pos 53:2 (2/8)
intron_pos 84:1 (3/8)
intron_pos 122:0 (4/8)
intron_pos 162:0 (5/8)
intron_pos 210:2 (6/8)
intron_pos 248:2 (7/8)
intron_pos 271:2 (8/8)
BEGIN
1 MLYSSDLLAI VGAGEQASLS PRRLCLFKTT TGLPLRELNF LTSILAVRMN KKRLVVVLLE
61 KTFVYDLNTL VMLDTIDTVP NPKGLSAFSP SLEGCYLAVP ASTTKGSVLV YNVMDLQSHS
121 EIDAHRSPLA AIALSSNGMY IATGSEQGTL IRVHLVSEAT KSYSFRRGTY PSTIYSLSFG
181 PSTQLPDILI ATSSSGSIHA FSLSLAINQR SKRSTSFLGS VLPDSVSDAL DPAHHHVLQN
241 AVSSGIRSYA VVRKIDKLEG TSSPSHFTSL RATVSVITYN GYFQEYTLSI NNKNESLWTL
301 EREFNLFSIT TG
//