LOCUS AEE85774.2 366 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana autophagy 18 B-like protein protein.
ACCESSION CP002687-5533
PROTEIN_ID AEE85774.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="ATG18B"
/locus_tag="AT4G30510"
/gene_synonym="ARABIDOPSIS THALIANA HOMOLOG OF YEAST
AUTOPHAGY 18 (ATG18) B"
/gene_synonym="ATATG18B"
/gene_synonym="F17I23.150"
/gene_synonym="F17I23_150"
/gene_synonym="homolog of yeast autophagy 18 (ATG18) B"
/inference="Similar to RNA sequence,
EST:INSD:EH991627.1,INSD:EL096992.1,INSD:EH866597.1,
INSD:EH821925.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY142529.1,INSD:BX826963.1"
/note="homolog of yeast autophagy 18 (ATG18) B (G18B);
CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing
domain (InterPro:IPR011046), WD40 repeat
(InterPro:IPR001680), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Transducin/WD40 repeat-like superfamily protein
(TAIR:AT3G62770.1); Has 1228 Blast hits to 1183 proteins
in 223 species: Archae - 0; Bacteria - 2; Metazoa - 531;
Fungi - 398; Plants - 152; Viruses - 2; Other Eukaryotes -
143 (source: NCBI BLink)."
/db_xref="TAIR:AT4G30510"
/db_xref="Araport:AT4G30510"
intron_pos 21:2 (1/10)
intron_pos 46:1 (2/10)
intron_pos 71:0 (3/10)
intron_pos 107:2 (4/10)
intron_pos 138:1 (5/10)
intron_pos 176:0 (6/10)
intron_pos 216:0 (7/10)
intron_pos 264:2 (8/10)
intron_pos 302:2 (9/10)
intron_pos 325:2 (10/10)
BEGIN
1 MANLSSLPSP IYCVSFNQDN SGFAISWKDS FKIFDSTTGR LCYERAAGAF VIVEMLYSSD
61 LLAIVGAGEQ ASLSPRRLCL FKTTTGLPLR ELNFLTSILA VRMNKKRLVV VLLEKTFVYD
121 LNTLVMLDTI DTVPNPKGLS AFSPSLEGCY LAVPASTTKG SVLVYNVMDL QSHSEIDAHR
181 SPLAAIALSS NGMYIATGSE QGTLIRVHLV SEATKSYSFR RGTYPSTIYS LSFGPSTQLP
241 DILIATSSSG SIHAFSLSLA INQRSKRSTS FLGSVLPDSV SDALDPAHHH VLQNAVSSGI
301 RSYAVVRKID KLEGTSSPSH FTSLRATVSV ITYNGYFQEY TLSINNKNES LWTLEREFNL
361 FSITTG
//