LOCUS AEE85746.1 282 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana xyloglucan endotransglucosylase/hydrolase
18 protein.
ACCESSION CP002687-5501
PROTEIN_ID AEE85746.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="XTH18"
/locus_tag="AT4G30280"
/gene_synonym="ATXTH18"
/gene_synonym="F17I23.380"
/gene_synonym="F17I23_380"
/gene_synonym="xyloglucan endotransglucosylase/hydrolase
18"
/gene_synonym="XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE
18"
/inference="Similar to RNA sequence,
EST:INSD:EL103750.1,INSD:CB252072.1,INSD:BP807084.1,
INSD:CB255289.1,INSD:CB258944.1,INSD:BP608032.1,
INSD:BP671369.1,INSD:BP842783.1,INSD:BE662721.1,
INSD:EL022015.1,INSD:EL018787.1,INSD:BP856516.2,
INSD:BP661970.1,INSD:AV536617.1,INSD:EL107409.1,
INSD:EH853269.1,INSD:BP864615.1,INSD:CB252716.1,
INSD:DR293025.1,INSD:BP843188.1,INSD:AV796399.1,
INSD:BP662982.1,INSD:EH905905.1,INSD:BP604916.1,
INSD:DR293030.1,INSD:DR293027.1,INSD:BP866898.1,
INSD:DR293029.1,INSD:DR293024.1,INSD:AI998301.1,
INSD:BP860287.1,INSD:AV543902.1,INSD:BP606221.1,
INSD:EL132435.1,INSD:BP620387.1,INSD:EL253283.1,
INSD:AV552350.1,INSD:CB185715.2,INSD:BP637594.1,
INSD:BP845544.1,INSD:BP865846.1,INSD:EL087247.1,
INSD:BP817118.1,INSD:BP805142.1,INSD:BP861766.1,
INSD:BP842076.1,INSD:BP849284.1,INSD:EL099254.1,
INSD:BP865108.1,INSD:T04197.1,INSD:AA042221.1,
INSD:CB252068.1,INSD:BP670360.1,INSD:AV536113.1,
INSD:DR293031.1,INSD:DR293026.1,INSD:BP859217.1,
INSD:DR293028.1,INSD:CB254758.1,INSD:AV536693.1,
INSD:N96426.1,INSD:CB253096.1,INSD:BP860462.1,
INSD:BP853566.1,INSD:BP862788.1,INSD:BP625605.1,
INSD:DR293032.1,INSD:AV826841.2,INSD:BP613884.1,
INSD:BP671050.1,INSD:BP804227.1,INSD:BP849466.1,
INSD:DR380690.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY085267.1,INSD:AF419549.1,INSD:AY097337.1,
INSD:AF083779.1,INSD:AK220650.1"
/note="xyloglucan endotransglucosylase/hydrolase 18
(XTH18); FUNCTIONS IN: hydrolase activity, acting on
glycosyl bonds, xyloglucan endotransglucosylase activity;
INVOLVED IN: xyloglucan metabolic process; LOCATED IN:
endomembrane system, apoplast, cell wall; EXPRESSED IN: 13
plant structures; EXPRESSED DURING: 7 growth stages;
CONTAINS InterPro DOMAIN/s: Xyloglucan
endotransglucosylase/hydrolase (InterPro:IPR016455),
Beta-glucanase (InterPro:IPR008264), Xyloglucan
endo-transglycosylase, C-terminal (InterPro:IPR010713),
Concanavalin A-like lectin/glucanase, subgroup
(InterPro:IPR013320), Glycoside hydrolase, family 16,
active site (InterPro:IPR008263), Concanavalin A-like
lectin/glucanase (InterPro:IPR008985), Glycoside
hydrolase, family 16 (InterPro:IPR000757); BEST
Arabidopsis thaliana protein match is: xyloglucan
endotransglucosylase/hydrolase 17 (TAIR:AT1G65310.1); Has
2232 Blast hits to 2210 proteins in 310 species: Archae -
0; Bacteria - 291; Metazoa - 0; Fungi - 455; Plants -
1387; Viruses - 0; Other Eukaryotes - 99 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G30280"
/db_xref="Araport:AT4G30280"
intron_pos 95:0 (1/2)
intron_pos 159:2 (2/2)
BEGIN
1 MKLSCGTSFA FLIMFLFAAQ SMHVYAGSFH KDVQIHWGDG RGKVRDRDGK LLSLSLDKSS
61 GSGFQSNQEF LYGKAEVQMK LVPGNSAGTV TTFYLKSPGT TWDEIDFEFL GNLSGHPYTL
121 HTNVYTKGSG DKEQQFHLWF DPTVNFHTYC ITWNPQRIIF TVDGIPIREF KNSESIGVPF
181 PTKQPMRLYA SLWEAEHWAT RGGLEKTDWS KAPFTAFYRN YNVEGCVWAN GKSSCPANSS
241 WFTQQLDSNG QTRMKGVQSK YMVYNYCNDK RRFPRGVPVE CS
//