LOCUS AEE85744.1 280 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Integral membrane Yip1 family protein protein.
ACCESSION CP002687-5499
PROTEIN_ID AEE85744.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G30260"
/gene_synonym="F9N11.110"
/gene_synonym="F9N11_110"
/gene_synonym="YIP4b"
/gene_synonym="YPT/RAB GTPase Interacting Protein 4b"
/inference="Similar to RNA sequence,
EST:INSD:EL025487.1,INSD:CD529456.1,INSD:DR255822.1,
INSD:BP863752.1,INSD:DR255820.1,INSD:DR359367.1,
INSD:DR255817.1,INSD:AV828523.1,INSD:DR255825.1,
INSD:AV563994.1,INSD:EH798844.1,INSD:AV441294.1,
INSD:DR255828.1,INSD:AV821332.1,INSD:BP799347.1,
INSD:EL304627.1,INSD:BP595260.1,INSD:BP808913.1,
INSD:EH811337.1,INSD:EL225457.1,INSD:EL111556.1,
INSD:Z48637.1,INSD:BP642509.1,INSD:EH894962.1,
INSD:BP665109.1,INSD:ES206506.1,INSD:BP852600.1,
INSD:BP857154.1,INSD:DR354124.1,INSD:DR255816.1,
INSD:BP569059.1,INSD:DR255823.1,INSD:DR255819.1,
INSD:BP563444.1,INSD:ES060558.1,INSD:BP782706.1,
INSD:BP786715.1,INSD:BP822621.1,INSD:AV801689.1,
INSD:EL102514.1,INSD:DR255827.1,INSD:DR255821.1,
INSD:EH988167.1,INSD:DR255824.1,INSD:EL105814.1,
INSD:DR255818.1,INSD:BP608139.1,INSD:BP669496.1,
INSD:EL323699.1,INSD:Z48553.1,INSD:ES072650.1,
INSD:DR255814.1,INSD:BP606258.1,INSD:AA394764.1,
INSD:DR255826.1,INSD:BP603071.1,INSD:EL059070.1,
INSD:ES052117.1,INSD:AV558278.1,INSD:BP823046.1,
INSD:EG519779.1,INSD:EL137643.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY056083.1,INSD:AY045675.1,INSD:AY093179.1,
INSD:BX826623.1"
/note="Integral membrane Yip1 family protein; FUNCTIONS
IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Yip1
domain (InterPro:IPR006977); BEST Arabidopsis thaliana
protein match is: Integral membrane Yip1 family protein
(TAIR:AT2G18840.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G30260"
/db_xref="Araport:AT4G30260"
intron_pos 170:0 (1/2)
intron_pos 195:0 (2/2)
BEGIN
1 MSHNDTIPLY QSSQSDIDEI ENMMNDSFQS GPGTVLPARP PSPIRPSIPV SSSPFVQSNL
61 PPLPPSSSSS TQKVMPVPAP PPLPSAGNEG NKSIGGSGFG SPPNTLTEPV WDTVKRDLSR
121 IVSNLKLVVF PNPYREDPGK ALRDWDLWGP FFFIVFLGLT LSWSASVKKS EVFAVAFALL
181 AAGAVILTLN VLLLGGHIIF FQSLSLLGYC LFPLDVGAVI CMLKDNVILK MVVVSVTLAW
241 SSWAAYPFMS AAVNPRRKAL ALYPVFLMYV SVGFLIIAIN
//