LOCUS AEE85735.1 714 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana vernalization5/VIN3-like protein protein.
ACCESSION CP002687-5485
PROTEIN_ID AEE85735.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="VEL1"
/locus_tag="AT4G30200"
/gene_synonym="vernalization5/VIN3-like"
/gene_synonym="vernalization5/VIN3-like 1"
/gene_synonym="VIL2"
/gene_synonym="VIN3-Like 2"
/inference="Similar to RNA sequence,
EST:INSD:BP603159.1,INSD:ES206770.1,INSD:ES167240.1,
INSD:ES066774.1,INSD:EL973642.1,INSD:BP830195.1,
INSD:EL146756.1,INSD:BP588972.1,INSD:BP784042.1,
INSD:EH861491.1,INSD:EG480006.1,INSD:EL073177.1,
INSD:CK121531.1,INSD:BP589133.1,INSD:BP577236.1,
INSD:EL156252.1,INSD:BE521476.1,INSD:Z30911.1,
INSD:BP781097.1,INSD:EL166557.1,INSD:BP605850.1,
INSD:EH801915.1,INSD:BP567156.1,INSD:BP598688.1,
INSD:BP589859.1,INSD:BP573549.1,INSD:BP619985.1,
INSD:BP619501.1,INSD:ES129807.1,INSD:BP602131.1,
INSD:BP810440.1,INSD:BP634143.1,INSD:BP609536.1,
INSD:BP580068.1,INSD:DR235010.1,INSD:N96869.1,
INSD:BP588037.1,INSD:BE844817.1,INSD:BP811546.1,
INSD:BP782036.1,INSD:AV556687.1,INSD:EG480803.1,
INSD:ES150447.1,INSD:BP796592.1,INSD:BP603049.1,
INSD:BP609193.1,INSD:AI992439.1,INSD:EL122419.1,
INSD:DR235011.1,INSD:BP590689.1,INSD:BP594317.1,
INSD:EL286684.1,INSD:EH858638.1,INSD:BP565686.1,
INSD:EL203212.1,INSD:BP579295.1,INSD:ES104524.1,
INSD:ES052679.1,INSD:CK121812.1,INSD:EG508039.1,
INSD:BP777764.1,INSD:CD529981.1,INSD:ES213550.1,
INSD:ES146425.1,INSD:EG508036.1,INSD:AV814568.1,
INSD:EL251888.1,INSD:BP790803.1,INSD:EH916500.1,
INSD:EL084339.1,INSD:EH972407.1"
/inference="Similar to RNA sequence,
mRNA:INSD:EF064792.1,INSD:AB050977.1,INSD:DQ067323.1"
/note="vernalization5/VIN3-like (VEL1); CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1423, plant
(InterPro:IPR004082), Fibronectin, type III-like fold
(InterPro:IPR008957), Fibronectin, type III
(InterPro:IPR003961); BEST Arabidopsis thaliana protein
match is: Fibronectin type III domain-containing protein
(TAIR:AT5G57380.1); Has 283 Blast hits to 258 proteins in
40 species: Archae - 0; Bacteria - 10; Metazoa - 3; Fungi
- 23; Plants - 240; Viruses - 0; Other Eukaryotes - 7
(source: NCBI BLink)."
/db_xref="TAIR:AT4G30200"
/db_xref="Araport:AT4G30200"
intron_pos 7:1 (1/3)
intron_pos 139:1 (2/3)
intron_pos 349:1 (3/3)
BEGIN
1 MDSSLDGAAG DSSKCSEMSV DEKRQLVYEL SKQSHLAAEV LQAWSRQEIL QILCAEMGKE
61 RKYTGLTKVK IIETLLKIVS EKNSGECEGK KRDSDCLPIQ RNTKRQRKVD NPSRYVIPAT
121 NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS
181 LWLTCSSDPP FEGESCGFSC HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK
241 KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301 GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDC SYVLSNEISA
361 DTATTGSTKI RFEDVNATSL TVVLASNEIP SPPNIVHYSI WHRKVPEKDY PEKSTCTLFI
421 PNTRFVVSGL APASEYCFKV VSYSGTREMG VDEINVLTRS AEEGANCSSA VERSVSPLTN
481 CSTLSSNPSS VEAESNNDYI VPKKPSSKNE DNNSPSVDES AAKRMKRTTD SDIVQIEKDV
541 EQIVLLDDEE QEAVLDKTES ETPVVVTTKS LVGNRNSSDA SLPITPFRSD EIKNRQARIE
601 ISMKDNCNNG DHSANGGTES GLEHCVKIIR QLECSGHIDK NFRQKFLTWY SLRATSQEIR
661 VVKIFIDTFI DDPMALAEQL IDTFDDRVSI KRSAVGGSGA SAVVPSGFCM KLWH
//