LOCUS AEE85734.1 702 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana vernalization5/VIN3-like protein protein.
ACCESSION CP002687-5484
PROTEIN_ID AEE85734.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="VEL1"
/locus_tag="AT4G30200"
/gene_synonym="vernalization5/VIN3-like"
/gene_synonym="vernalization5/VIN3-like 1"
/gene_synonym="VIL2"
/gene_synonym="VIN3-Like 2"
/inference="Similar to RNA sequence,
EST:INSD:BP603159.1,INSD:ES206770.1,INSD:ES167240.1,
INSD:ES066774.1,INSD:EL973642.1,INSD:BP830195.1,
INSD:EL146756.1,INSD:BP588972.1,INSD:BP784042.1,
INSD:EH861491.1,INSD:EG480006.1,INSD:EL073177.1,
INSD:CK121531.1,INSD:BP589133.1,INSD:BP577236.1,
INSD:EL156252.1,INSD:BP781097.1,INSD:EL166557.1,
INSD:BP605850.1,INSD:EH801915.1,INSD:BP567156.1,
INSD:BP598688.1,INSD:BP589859.1,INSD:BP573549.1,
INSD:BP619985.1,INSD:BP619501.1,INSD:ES129807.1,
INSD:BP602131.1,INSD:BP810440.1,INSD:BP634143.1,
INSD:BP609536.1,INSD:BP580068.1,INSD:DR235010.1,
INSD:N96869.1,INSD:BP588037.1,INSD:BE844817.1,
INSD:BP811546.1,INSD:BP782036.1,INSD:EL034224.1,
INSD:AV556687.1,INSD:EL327307.1,INSD:ES150447.1,
INSD:BP796592.1,INSD:BP603049.1,INSD:BP609193.1,
INSD:AI992439.1,INSD:EL122419.1,INSD:DR235011.1,
INSD:BP590689.1,INSD:BP594317.1,INSD:EL286684.1,
INSD:EH858638.1,INSD:BP565686.1,INSD:EL203212.1,
INSD:BP579295.1,INSD:ES104524.1,INSD:ES052679.1,
INSD:CK121812.1,INSD:EG508039.1,INSD:BP777764.1,
INSD:CD529981.1,INSD:ES213550.1,INSD:ES146425.1,
INSD:EG508036.1,INSD:AV814568.1,INSD:EL251888.1,
INSD:BP790803.1,INSD:EH916500.1,INSD:EL084339.1,
INSD:EH972407.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT008428.1,INSD:BX826767.1,INSD:DQ067323.1"
/note="vernalization5/VIN3-like (VEL1); CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1423, plant
(InterPro:IPR004082), Fibronectin, type III-like fold
(InterPro:IPR008957), Fibronectin, type III
(InterPro:IPR003961); BEST Arabidopsis thaliana protein
match is: Fibronectin type III domain-containing protein
(TAIR:AT5G57380.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT4G30200"
/db_xref="Araport:AT4G30200"
intron_pos 7:1 (1/3)
intron_pos 139:1 (2/3)
intron_pos 349:1 (3/3)
BEGIN
1 MDSSLDGAAG DSSKCSEMSV DEKRQLVYEL SKQSHLAAEV LQAWSRQEIL QILCAEMGKE
61 RKYTGLTKVK IIETLLKIVS EKNSGECEGK KRDSDCLPIQ RNTKRQRKVD NPSRYVIPAT
121 NIVTSNNASG SCSSVNTKGE STTIYCKNLA CRAVLRQEDS FCRRCSCCIC RKYDDNKDPS
181 LWLTCSSDPP FEGESCGFSC HLECAFNTEK SGLGKDKQSE GCCFYCVSCG KANSLLECWK
241 KQLTIAKETR RVEVLCYRLF LVQKLLKSST KYRNLCEVVD EAVKTLEADV GPLTGLPMKM
301 GRGIVNRLHS GPDVQKLCSS ALESLETIAT TPPDVAALPS PRSSKMQQDT ATTGSTKIRF
361 EDVNATSLTV VLASNEIPSP PNIVHYSIWH RKVPEKDYPE KSTCTLFIPN TRFVVSGLAP
421 ASEYCFKVVS YSGTREMGVD EINVLTRSAE EGANCSSAVE RSVSPLTNCS TLSSNPSSVE
481 AESNNDYIVP KKPSSKNEDN NSPSVDESAA KRMKRTTDSD IVQIEKDVEQ IVLLDDEEQE
541 AVLDKTESET PVVVTTKSLV GNRNSSDASL PITPFRSDEI KNRQARIEIS MKDNCNNGDH
601 SANGGTESGL EHCVKIIRQL ECSGHIDKNF RQKFLTWYSL RATSQEIRVV KIFIDTFIDD
661 PMALAEQLID TFDDRVSIKR SAVGGSGASA VVPSGFCMKL WH
//