LOCUS AEE85733.1 685 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana vernalization5/VIN3-like protein protein.
ACCESSION CP002687-5486
PROTEIN_ID AEE85733.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="VEL1"
/locus_tag="AT4G30200"
/gene_synonym="vernalization5/VIN3-like"
/gene_synonym="vernalization5/VIN3-like 1"
/gene_synonym="VIL2"
/gene_synonym="VIN3-Like 2"
/inference="Similar to RNA sequence,
EST:INSD:BP603159.1,INSD:ES206770.1,INSD:EL973642.1,
INSD:EL146756.1,INSD:BP588972.1,INSD:BP784042.1,
INSD:EH861491.1,INSD:EL073177.1,INSD:CK121531.1,
INSD:BP577236.1,INSD:BP589133.1,INSD:EL156252.1,
INSD:BP781097.1,INSD:EL166557.1,INSD:BP605850.1,
INSD:EH801915.1,INSD:BP567156.1,INSD:BP598688.1,
INSD:BP589859.1,INSD:BP573549.1,INSD:BP619985.1,
INSD:BP619501.1,INSD:ES129807.1,INSD:BP602131.1,
INSD:BP634143.1,INSD:BP609536.1,INSD:BP580068.1,
INSD:BP588037.1,INSD:BE844817.1,INSD:BP782036.1,
INSD:EL034224.1,INSD:AV556687.1,INSD:ES150447.1,
INSD:EL327307.1,INSD:BP603049.1,INSD:BP609193.1,
INSD:AI992439.1,INSD:EL122419.1,INSD:BP590689.1,
INSD:BP594317.1,INSD:EL286684.1,INSD:EH858638.1,
INSD:BP565686.1,INSD:EL203212.1,INSD:BP579295.1,
INSD:ES052679.1,INSD:CK121812.1,INSD:EG508039.1,
INSD:BP777764.1,INSD:CD529981.1,INSD:ES146425.1,
INSD:AV814568.1,INSD:EL251888.1,INSD:BP790803.1,
INSD:EH916500.1,INSD:EL084339.1,INSD:EH972407.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT008428.1,INSD:BT002499.1,INSD:DQ067323.1"
/note="vernalization5/VIN3-like (VEL1); CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1423, plant
(InterPro:IPR004082), Fibronectin, type III-like fold
(InterPro:IPR008957), Fibronectin, type III
(InterPro:IPR003961); BEST Arabidopsis thaliana protein
match is: Fibronectin type III domain-containing protein
(TAIR:AT5G57380.1); Has 270 Blast hits to 250 proteins in
39 species: Archae - 0; Bacteria - 2; Metazoa - 8; Fungi -
14; Plants - 239; Viruses - 0; Other Eukaryotes - 7
(source: NCBI BLink)."
/db_xref="TAIR:AT4G30200"
/db_xref="Araport:AT4G30200"
intron_pos 122:1 (1/2)
intron_pos 332:1 (2/2)
BEGIN
1 MSVDEKRQLV YELSKQSHLA AEVLQAWSRQ EILQILCAEM GKERKYTGLT KVKIIETLLK
61 IVSEKNSGEC EGKKRDSDCL PIQRNTKRQR KVDNPSRYVI PATNIVTSNN ASGSCSSVNT
121 KGESTTIYCK NLACRAVLRQ EDSFCRRCSC CICRKYDDNK DPSLWLTCSS DPPFEGESCG
181 FSCHLECAFN TEKSGLGKDK QSEGCCFYCV SCGKANSLLE CWKKQLTIAK ETRRVEVLCY
241 RLFLVQKLLK SSTKYRNLCE VVDEAVKTLE ADVGPLTGLP MKMGRGIVNR LHSGPDVQKL
301 CSSALESLET IATTPPDVAA LPSPRSSKMQ QDTATTGSTK IRFEDVNATS LTVVLASNEI
361 PSPPNIVHYS IWHRKVPEKD YPEKSTCTLF IPNTRFVVSG LAPASEYCFK VVSYSGTREM
421 GVDEINVLTR SAEEGANCSS AVERSVSPLT NCSTLSSNPS SVEAESNNDY IVPKKPSSKN
481 EDNNSPSVDE SAAKRMKRTT DSDIVQIEKD VEQIVLLDDE EQEAVLDKTE SETPVVVTTK
541 SLVGNRNSSD ASLPITPFRS DEIKNRQARI EISMKDNCNN GDHSANGGTE SGLEHCVKII
601 RQLECSGHID KNFRQKFLTW YSLRATSQEI RVVKIFIDTF IDDPMALAEQ LIDTFDDRVS
661 IKRSAVGGSG ASAVVPSGFC MKLWH
//