LOCUS AEE85701.1 703 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ypt/Rab-GAP domain of gyp1p superfamily
protein protein.
ACCESSION CP002687-5438
PROTEIN_ID AEE85701.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G29950"
/inference="Similar to RNA sequence,
EST:INSD:EL153959.1,INSD:EG510290.1,INSD:ES095061.1,
INSD:EG528489.1,INSD:BP616936.1,INSD:EL327427.1,
INSD:BP809228.1,INSD:BX838888.1,INSD:EL264823.1,
INSD:EH904152.1,INSD:BP634264.1,INSD:EG510292.1,
INSD:R86794.1,INSD:BP828576.1,INSD:BP627185.1,
INSD:BP620949.1,INSD:EL124083.1,INSD:BP609169.1,
INSD:EL293380.1,INSD:EG528467.1,INSD:BP604184.1,
INSD:CB260900.1,INSD:EL133643.1,INSD:EL211408.1,
INSD:EH863729.1,INSD:BX834535.1,INSD:EH908326.1,
INSD:BX835268.1,INSD:BP634265.1,INSD:ES029232.1,
INSD:BX834617.1,INSD:EL298145.1,INSD:EH951066.1,
INSD:BX837733.1,INSD:AA395196.1,INSD:AA042408.1,
INSD:EL278304.1,INSD:ES058078.1,INSD:EL020365.1,
INSD:BP598708.1,INSD:AV804148.1,INSD:BP623856.1,
INSD:AV829053.1,INSD:EG461448.1,INSD:AV523595.1,
INSD:AV546025.1,INSD:EG445003.1,INSD:EL087165.1,
INSD:EL166319.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK221075.1,INSD:AF126057.2"
/note="Ypt/Rab-GAP domain of gyp1p superfamily protein;
FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN:
regulation of Rab GTPase activity; LOCATED IN:
intracellular; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST
Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain
of gyp1p superfamily protein (TAIR:AT2G19240.1); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G29950"
/db_xref="Araport:AT4G29950"
intron_pos 21:1 (1/2)
intron_pos 653:0 (2/2)
BEGIN
1 MLRRILLLWC LKHPEYGYRQ GMHELLAPLL YVLHVDVDRL SEVRKSYEDH FIDRFDGLSF
61 EERDITYNFE FKKFLEDFTD DEIGGIQGNS KKIKSLDELD PEIQSIVRLS DAYGAEGELG
121 IVLSEKFMEH DAYCMFDALM NGVHGCVAMA GFFAYSPASG SHTGLPPVLE ASTAFYHLLS
181 FVDSSLHSHL VELGVEPQYF GLRWLRVLFG REFLLQDLLI VWDEIFSADN TTRTDADNNT
241 NQSYKIFDSP RGALISGMAV SMILCLRSSL LATENAASCL QRLLNFPEKI DVRKIIEKAK
301 SLQTLALDDD VRSSALSIND GFDQSISPAV PARTNSFPSG STSPKSPLII TPQSYWEDQW
361 RVLHKAAEEE KKSPSPIQKK KPWFRVKRLF RAESEPTHSA KSPNGKSEVK ISSVARNLLE
421 DFNRQLVSEP VEANPIDVVN NEDSSIRETE DINTDFETAA EESIVMEENS SDLFSDPNSP
481 LRDSNYIEND SDSSNESNLF PDETVKDRET SVVDSPLSIS SQPSMEFIVS LSKDQETSVV
541 DSPLPVSSQP SIEFPVTQSN DEDNAADKSV ANIKERSKVL PGKFQWFWKF GRNVTAEETR
601 CNGVESSKSD LVCSSESHSL PQASSSGSKG DTDQNVMNTL KNLGNSMLEH IQVIESVFQQ
661 ERGQVQAGLI ENLSKNNLVE KGQVTAMTAL KELRKISNLL LEM
//