LOCUS AEE85700.1 828 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ypt/Rab-GAP domain of gyp1p superfamily
protein protein.
ACCESSION CP002687-5436
PROTEIN_ID AEE85700.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G29950"
/inference="Similar to RNA sequence,
EST:INSD:EL153959.1,INSD:EG510290.1,INSD:ES095061.1,
INSD:EG528489.1,INSD:BP616936.1,INSD:BP809228.1,
INSD:EL327427.1,INSD:BX838888.1,INSD:EL264823.1,
INSD:EH904152.1,INSD:BP634264.1,INSD:EG510292.1,
INSD:R86794.1,INSD:BP828576.1,INSD:BP627185.1,
INSD:BP620949.1,INSD:EL124083.1,INSD:EG474398.1,
INSD:BP609169.1,INSD:EL293380.1,INSD:EG528467.1,
INSD:BP604184.1,INSD:BX837642.1,INSD:CB260900.1,
INSD:EL133643.1,INSD:EL211408.1,INSD:EH863729.1,
INSD:BX834535.1,INSD:EH908326.1,INSD:BX835268.1,
INSD:BP634265.1,INSD:ES029232.1,INSD:BX834617.1,
INSD:EL298145.1,INSD:EH951066.1,INSD:AA395196.1,
INSD:AA042408.1,INSD:EL278304.1,INSD:EL020365.1,
INSD:ES058078.1,INSD:BP598708.1,INSD:AV804148.1,
INSD:BP623856.1,INSD:AV829053.1,INSD:EG461448.1,
INSD:BX838778.1,INSD:AV523595.1,INSD:AV546025.1,
INSD:EG445003.1,INSD:EL087165.1,INSD:EL166319.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK221075.1,INSD:AY096528.1,INSD:AF126057.2,
INSD:AY074278.1"
/note="Ypt/Rab-GAP domain of gyp1p superfamily protein;
FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN:
regulation of Rab GTPase activity; LOCATED IN:
intracellular; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST
Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain
of gyp1p superfamily protein (TAIR:AT2G19240.1); Has 1856
Blast hits to 1473 proteins in 235 species: Archae - 2;
Bacteria - 59; Metazoa - 791; Fungi - 326; Plants - 250;
Viruses - 6; Other Eukaryotes - 422 (source: NCBI BLink)."
/db_xref="TAIR:AT4G29950"
/db_xref="Araport:AT4G29950"
intron_pos 52:2 (1/4)
intron_pos 87:1 (2/4)
intron_pos 146:1 (3/4)
intron_pos 778:0 (4/4)
BEGIN
1 MVPSEIESLG DESDRRFANL RGLRWRVNLG VLPFQSSSID DLRKATAESR RRYAALRRRL
61 LIDPHLSKDV RNSPDLSIDN PLSQNPDSTW GRFFRNAELE KTLDQDLSRL YPEHWSYFQA
121 PGCQGMLRRI LLLWCLKHPE YGYRQGMHEL LAPLLYVLHV DVDRLSEVRK SYEDHFIDRF
181 DGLSFEERDI TYNFEFKKFL EDFTDDEIGG IQGNSKKIKS LDELDPEIQS IVRLSDAYGA
241 EGELGIVLSE KFMEHDAYCM FDALMNGVHG CVAMAGFFAY SPASGSHTGL PPVLEASTAF
301 YHLLSFVDSS LHSHLVELGV EPQYFGLRWL RVLFGREFLL QDLLIVWDEI FSADNTTRTD
361 ADNNTNQSYK IFDSPRGALI SGMAVSMILC LRSSLLATEN AASCLQRLLN FPEKIDVRKI
421 IEKAKSLQTL ALDDDVRSSA LSINDGFDQS ISPAVPARTN SFPSGSTSPK SPLIITPQSY
481 WEDQWRVLHK AAEEEKKSPS PIQKKKPWFR VKRLFRAESE PTHSAKSPNG KSEVKISSVA
541 RNLLEDFNRQ LVSEPVEANP IDVVNNEDSS IRETEDINTD FETAAEESIV MEENSSDLFS
601 DPNSPLRDSN YIENDSDSSN ESNLFPDETV KDRETSVVDS PLSISSQPSM EFIVSLSKDQ
661 ETSVVDSPLP VSSQPSIEFP VTQSNDEDNA ADKSVANIKE RSKVLPGKFQ WFWKFGRNVT
721 AEETRCNGVE SSKSDLVCSS ESHSLPQASS SGSKGDTDQN VMNTLKNLGN SMLEHIQVIE
781 SVFQQERGQV QAGLIENLSK NNLVEKGQVT AMTALKELRK ISNLLLEM
//