LOCUS AEE85698.1 796 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pathogenesis related homeodomain
protein A protein.
ACCESSION CP002687-5435
PROTEIN_ID AEE85698.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PRHA"
/locus_tag="AT4G29940"
/gene_synonym="F27B13.180"
/gene_synonym="F27B13_180"
/gene_synonym="HOMEODOMAIN PROTEIN"
/gene_synonym="pathogenesis related homeodomain protein A"
/gene_synonym="pathogenesis related homeodomain protein A"
/inference="Similar to RNA sequence,
EST:INSD:DR751621.1,INSD:DR368608.1,INSD:EL992263.1,
INSD:ES118655.1,INSD:ES215955.1,INSD:EL263066.1,
INSD:ES035766.1,INSD:EH979560.1,INSD:DR751620.1,
INSD:ES078913.1,INSD:ES163181.1,INSD:EL994564.1,
INSD:ES090647.1,INSD:AI997576.1,INSD:EL309697.1,
INSD:ES028215.1,INSD:AW004559.1,INSD:ES108388.1,
INSD:ES150167.1,INSD:EL337531.1"
/inference="Similar to RNA sequence, mRNA:INSD:L21991.1"
/note="pathogenesis related homeodomain protein A (PRHA);
CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type,
conserved site (InterPro:IPR019786), Zinc finger, PHD-type
(InterPro:IPR001965), Homeobox (InterPro:IPR001356),
Homeodomain-like (InterPro:IPR009057), Zinc finger,
FYVE/PHD-type (InterPro:IPR011011), Zinc finger,
PHD-finger (InterPro:IPR019787), Homeodomain-related
(InterPro:IPR012287); BEST Arabidopsis thaliana protein
match is: Homeodomain-like protein with RING/FYVE/PHD-type
zinc finger domain (TAIR:AT3G19510.1); Has 20197 Blast
hits to 13808 proteins in 1056 species: Archae - 100;
Bacteria - 2032; Metazoa - 7887; Fungi - 1709; Plants -
882; Viruses - 177; Other Eukaryotes - 7410 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G29940"
/db_xref="Araport:AT4G29940"
intron_pos 135:2 (1/13)
intron_pos 191:0 (2/13)
intron_pos 232:1 (3/13)
intron_pos 270:0 (4/13)
intron_pos 385:0 (5/13)
intron_pos 467:0 (6/13)
intron_pos 497:0 (7/13)
intron_pos 514:0 (8/13)
intron_pos 605:0 (9/13)
intron_pos 632:0 (10/13)
intron_pos 659:0 (11/13)
intron_pos 686:0 (12/13)
intron_pos 713:0 (13/13)
BEGIN
1 MEESETKGRI SQETDKACVS VERIGSTLLS SFVKKGKEVS NKRNSKQNKR KAEEELCSKS
61 RTKKYSRGWV RCEEMEEEKV KKTRKRKSKR QQKDNKVEVD DSLRLQRRTR YLLIKMKMQQ
121 NLIDAYATEG WKGQSREKIR PDKELERARK EILNCKLGLR DAIRQLDLLS SVGSMEEKVI
181 ASDGSIHHDH IFCAECNSRE AFPDNDIILC DGTCNRAFHQ KCLDPPLETE SIPPGDQGWF
241 CKFCDCKIEI IDTMNAQIGT HFPVDSNWQD IFNEEASLPI GSEATVNNEA DWPSDDSKDD
301 DYDPEMRENG GGNSSNVSGD GGGDNDEESI STSLSLSSDG VALSTGSWEG HRLSNMVEQC
361 ETSNEETVCG PRQRRTVDYT QLYYEMFGKD AVLQEQGSED EDWGPNDRRK RKRESDAGST
421 LVTMCESSKK DQDVVETLEQ SERDSVSVEN KGGRRRMFRL PRNAVEKLRQ VFAETELPSK
481 AVRDRLAKEL SLDPEKVNKW FKNTRYMALR NRKTESVKQP GDSKTVSGGD SGPEAVMENN
541 TETNEVQDTL DDTVPPGFDA TNQNILSPCN NNQEEFQQEN VSFPSPTDES QQYLEQNDSS
601 FVLVPHEKQS SEISLKTAVE ENETESKMMK EPHEELSSEM SLKTAAEEKE TESKMIEEPH
661 EELSREMSLK TAVEEKETES KMMEEPHDEL NSEMSLSTAV EEKETGSKMT EESHEELSNE
721 MSLEEKETGR KMTEEEELEA VMEMLCRTEN KLLDVTQRLD RFKTPKGRKK LGNSSSPLLE
781 EDSVVYVPIA EIKEKR
//