LOCUS AEE85628.1 143 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal L28e protein family protein.
ACCESSION CP002687-5346
PROTEIN_ID AEE85628.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G29410"
/gene_synonym="F17A13.230"
/gene_synonym="F17A13_230"
/inference="Similar to RNA sequence,
EST:INSD:EG500254.1,INSD:EG513226.1,INSD:ES007156.1,
INSD:EG500255.1,INSD:BP669895.1,INSD:EL025940.1,
INSD:EL300164.1,INSD:EH916355.1,INSD:AV544835.1,
INSD:BP650443.1,INSD:EG500249.1,INSD:BP644973.1,
INSD:EH912424.1,INSD:AV788181.1,INSD:DR212010.1,
INSD:EH889554.1,INSD:EL971074.1,INSD:EL232769.1,
INSD:EL187804.1,INSD:BP795040.1,INSD:BP651938.1,
INSD:ES025775.1,INSD:AV544976.1,INSD:EG500252.1,
INSD:AV801623.1,INSD:EL099916.1,INSD:EG500253.1,
INSD:BP633203.1,INSD:AV556012.1,INSD:AV783763.1,
INSD:EG500258.1,INSD:ES161604.1,INSD:ES101967.1,
INSD:EL203329.1,INSD:EL994513.1,INSD:AV530904.1,
INSD:EH982248.1,INSD:AA598177.1,INSD:ES142567.1,
INSD:ES065209.1,INSD:CF774480.1,INSD:EG500257.1,
INSD:EL986368.1,INSD:ES084590.1,INSD:AV531508.1,
INSD:EG500251.1,INSD:ES046378.1,INSD:EG500256.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT000047.1"
/note="Ribosomal L28e protein family; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation, ribosome biogenesis; LOCATED IN: ribosome,
cytosolic large ribosomal subunit, plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal
protein L28e (InterPro:IPR002672); BEST Arabidopsis
thaliana protein match is: Ribosomal L28e protein family
(TAIR:AT2G19730.3); Has 531 Blast hits to 531 proteins in
207 species: Archae - 0; Bacteria - 0; Metazoa - 284;
Fungi - 94; Plants - 107; Viruses - 0; Other Eukaryotes -
46 (source: NCBI BLink)."
/db_xref="TAIR:AT4G29410"
/db_xref="Araport:AT4G29410"
intron_pos 50:1 (1/2)
intron_pos 105:0 (2/2)
BEGIN
1 MATVPGQLIW EIVKRNNCFL VKQFGRGNAK VQFSKESNNL VNINSYKHSG LANKKTVTIQ
61 AAGKDQGVVL GTTKTKRQNK PKLSVNKSIL KKEFSRMSKV VANQVVDNYY RPDLKKAALA
121 RLSAISKGLR VAKSGPKRRN RQA
//