LOCUS AEE85618.1 266 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DERLIN-1 protein.
ACCESSION CP002687-5334
PROTEIN_ID AEE85618.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="DER1"
/locus_tag="AT4G29330"
/gene_synonym="DERLIN-1"
/gene_synonym="F17A13.150"
/gene_synonym="F17A13_150"
/inference="Similar to RNA sequence,
EST:INSD:AV538987.1,INSD:EL967669.1,INSD:AV530840.1,
INSD:EH916526.1,INSD:ES056629.1,INSD:DR368207.1,
INSD:CD532058.1,INSD:DR368208.1,INSD:DR384175.1,
INSD:AV557525.1,INSD:BP814112.1,INSD:AV823636.1,
INSD:AV551326.1,INSD:EH798047.1,INSD:ES195649.1,
INSD:AV566684.1,INSD:AV784640.1,INSD:ES008846.1,
INSD:ES067008.1,INSD:BP818086.1,INSD:DR368209.1,
INSD:BP822746.1,INSD:ES142594.1,INSD:ES194661.1,
INSD:EL276225.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX826348.1,INSD:AY063817.1,INSD:AY096457.1"
/note="DERLIN-1 (DER1); CONTAINS InterPro DOMAIN/s:
Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana
protein match is: DERLIN-2.2 (TAIR:AT4G04860.1); Has 918
Blast hits to 916 proteins in 241 species: Archae - 0;
Bacteria - 22; Metazoa - 340; Fungi - 200; Plants - 147;
Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink)."
/db_xref="TAIR:AT4G29330"
/db_xref="Araport:AT4G29330"
intron_pos 6:2 (1/6)
intron_pos 52:0 (2/6)
intron_pos 76:2 (3/6)
intron_pos 108:0 (4/6)
intron_pos 151:0 (5/6)
intron_pos 204:2 (6/6)
BEGIN
1 MSSPGEFYNS LPPITKAYGT LCFFTTVATQ LGLVAPVHIA LIPELVLKQF QIWRLITNLF
61 FLGGFSINFG IRLLMIARYG VQLEKGPFER RTADFLWMMI FGSFTLLVLS VIPFFWTPFL
121 GVSLVFMLLY LWSREFPNAN ISLYGLVTLK AFYLPWAMLA LDVIFGSPIM PDLLGIIAGH
181 LYYFLTVLHP LATGKNYLKT PKWVNKIVAR WRIGAPVASV RQAGGVGAAG PGAGGGVGGG
241 GAYSSARAPP ESSNTAFRGR SYRLTD
//