LOCUS AEE85585.1 575 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribonuclease H-like superfamily protein
protein.
ACCESSION CP002687-5294
PROTEIN_ID AEE85585.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G29090"
/gene_synonym="F19B15.120"
/gene_synonym="F19B15_120"
/inference="Similar to RNA sequence, mRNA:INSD:DQ056660.1"
/note="Ribonuclease H-like superfamily protein; FUNCTIONS
IN: RNA binding, RNA-directed DNA polymerase activity,
nucleic acid binding; INVOLVED IN: RNA-dependent DNA
replication; LOCATED IN: endomembrane system; CONTAINS
InterPro DOMAIN/s: Polynucleotidyl transferase,
ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA
polymerase (reverse transcriptase), related
(InterPro:IPR015706); BEST Arabidopsis thaliana protein
match is: Polynucleotidyl transferase, ribonuclease H-like
superfamily protein (TAIR:AT2G34320.1); Has 2218 Blast
hits to 2138 proteins in 33 species: Archae - 2; Bacteria
- 6; Metazoa - 6; Fungi - 0; Plants - 2203; Viruses - 0;
Other Eukaryotes - 1 (source: NCBI BLink)."
/db_xref="TAIR:AT4G29090"
/db_xref="Araport:AT4G29090"
BEGIN
1 MALPTYTMAC FLLPKTVCKQ IISVLADFWW RNKQEAKGMH WKAWDHLSCY KAEGGIGFKD
61 IEAFNLALLG KQMWRMLSRP ESLMAKVFKS RYFHKSDPLN APLGSRPSFV WKSIHASQEI
121 LRQGARAVVG NGEDIIIWRH KWLDSKPASA ALRMQRVPPQ EYASVSSILK VSDLIDESGR
181 EWRKDVIEML FPEVERKLIG ELRPGGRRIL DSYTWDYTSS GDYTVKSGYW VLTQIINKRS
241 SPQEVSEPSL NPIYQKIWKS QTSPKIQHFL WKCLSNSLPV AGALAYRHLS KESACIRCPS
301 CKETVNHLLF KCTFARLTWA ISSIPIPLGG EWADSIYVNL YWVFNLGNGN PQWEKASQLV
361 PWLLWRLWKN RNELVFRGRE FNAQEVLRRA EDDLEEWRIR TEAESCGTKP QVNRSSCGRW
421 RPPPHQWVKC NTDATWNRDN ERCGIGWVLR NEKGEVKWMG ARALPKLKSV LEAELEAMRW
481 AVLSLSRFQY NYVIFESDSQ VLIEILNNDE IWPSLKPTIQ DLQRLLSQFT EVKFVFIPRE
541 GNTLAERVAR ESLSFLNYDP KLYSIVPSWA RSSMD
//