LOCUS AEE85581.1 709 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana elongation factor Ts family protein protein.
ACCESSION CP002687-5290
PROTEIN_ID AEE85581.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="emb2726"
/locus_tag="AT4G29060"
/gene_synonym="embryo defective 2726"
/gene_synonym="F19B15.90"
/gene_synonym="F19B15_90"
/inference="Similar to RNA sequence,
EST:INSD:W43663.1,INSD:EH884446.1,INSD:EH958296.1,
INSD:EL225144.1,INSD:EL196492.1,INSD:EL210138.1,
INSD:EL191882.1,INSD:ES049214.1,INSD:BP607193.1,
INSD:EL309674.1,INSD:EH883359.1,INSD:EL089755.1,
INSD:EH833946.1,INSD:EH816517.1,INSD:EH907986.1,
INSD:EH929151.1,INSD:EH808624.1,INSD:EL027064.1,
INSD:AV792773.1,INSD:EL042547.1,INSD:EH855566.1,
INSD:EL168074.1,INSD:EH838258.1,INSD:EL199765.1,
INSD:EL229737.1,INSD:EH944167.1,INSD:EH846565.1,
INSD:ES074187.1,INSD:EH827174.1,INSD:EL305221.1,
INSD:AV814756.1,INSD:N96661.1,INSD:EL247218.1,
INSD:EL110507.1,INSD:EL126996.1,INSD:ES001986.1,
INSD:EL227712.1,INSD:EH969974.1,INSD:EH911741.1,
INSD:EH873185.1,INSD:AV827800.1,INSD:EL186726.1,
INSD:AV831088.1,INSD:EL201134.1,INSD:ES153699.1,
INSD:ES213408.1,INSD:AV785961.1,INSD:EL093960.1,
INSD:EH991440.1,INSD:EH960771.1,INSD:EL048397.1,
INSD:EL253458.1,INSD:EG454337.1,INSD:EH908731.1,
INSD:EL286490.1,INSD:EH961036.1,INSD:EH973928.1,
INSD:EH885709.1,INSD:EL108609.1,INSD:EL153987.1,
INSD:EL073266.1,INSD:ES190698.1,INSD:EL338614.1,
INSD:AV830205.1,INSD:EG454338.1,INSD:EL262023.1,
INSD:EH890845.1,INSD:AV440565.1,INSD:AV810626.1,
INSD:ES081672.1,INSD:EL164232.1,INSD:EH848373.1,
INSD:EL149074.1,INSD:EL211099.1,INSD:EL262237.1,
INSD:EL278810.1,INSD:EL244844.1,INSD:EL010834.1,
INSD:BP590871.1,INSD:EL082521.1,INSD:EL003612.1,
INSD:EL334088.1,INSD:EL127579.1,INSD:EL022801.1,
INSD:EL159834.1,INSD:EL095235.1,INSD:AV830654.1,
INSD:EL156580.1,INSD:EL175659.1,INSD:W43841.1,
INSD:EH941216.1,INSD:EH911865.1,INSD:EL157401.1,
INSD:EL239216.1,INSD:EH862550.1,INSD:BP782583.1,
INSD:EL124470.1,INSD:AV823551.1,INSD:ES034409.1,
INSD:EL085744.1,INSD:EL150736.1,INSD:EL229601.1,
INSD:BP778074.1,INSD:ES124616.1,INSD:EL166400.1,
INSD:ES198031.1,INSD:EL016097.1,INSD:EH892632.1,
INSD:EL147893.1,INSD:ES164114.1,INSD:EL007655.1,
INSD:AV799459.1,INSD:EL225945.1,INSD:EL236176.1,
INSD:EH808138.1,INSD:EL218801.1,INSD:EL049226.1,
INSD:EL115587.1,INSD:EL262046.1,INSD:EL132947.1,
INSD:EH808729.1,INSD:EH844590.1,INSD:EH987928.1,
INSD:EL153141.1,INSD:EL242578.1,INSD:EL171310.1,
INSD:EL024717.1,INSD:EH957202.1,INSD:EH798510.1,
INSD:EL077457.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY661462.1"
/note="embryo defective 2726 (emb2726); FUNCTIONS IN: RNA
binding, translation elongation factor activity; INVOLVED
IN: translational elongation, response to cadmium ion,
embryo development ending in seed dormancy; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Nucleic acid-binding, OB-fold (InterPro:IPR012340),
Ubiquitin-associated/translation elongation factor EF1B,
N-terminal (InterPro:IPR000449), Ribosomal protein S1,
RNA-binding domain (InterPro:IPR003029), Translation
elongation factor EFTs/EF1B (InterPro:IPR001816),
Translation elongation factor EFTs/EF1B, dimerisation
(InterPro:IPR014039), Nucleic acid-binding, OB-fold-like
(InterPro:IPR016027), Translation elongation factor Ts,
conserved site (InterPro:IPR018101), UBA-like
(InterPro:IPR009060); BEST Arabidopsis thaliana protein
match is: translation elongation factor Ts (EF-Ts),
putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT4G29060"
/db_xref="Araport:AT4G29060"
intron_pos 449:1 (1/3)
intron_pos 518:1 (2/3)
intron_pos 616:0 (3/3)
BEGIN
1 MATITPSSIS NAWLIPGASF TVKKSDCSIK CSFSRKAGKQ ILSSTQRLVL PLSTSLRLFP
61 THGRQFVLHP HRRATGTDVV AAVEEQDSTP VVAEDKETVA SEKSDAPAPT SQSRGTARPG
121 RKSEMPAVKN EELVPGATFT GKVRAIQPFG AFVDFGAFTD GLVHVSQLSD NFVKDVSSVV
181 TIGQEVKVRL VEADIESKRI SLTMRENDDP PKRQSGGSDK PRSGGKRDGS KGGGQRKGEG
241 FNSKFAKGQM LDGVVKNLTR SGAFITIGEG EEGFLPTAEE ADDGIGSMMM GGSSLQAGQE
301 VKVRVLRIAR GRVTLTMKEE DDGKFDETTT QGVVHTATNP FMLAFRKNEE IAAFLDKREE
361 EAEKPPVETP VEPEAEASVT SAEVEESVCV PAEVTSEEVP SSETPKVVEE EVIATKAEDD
421 SPEKEEQTET LAAAAEAEEV VPPIPETKSE EEIVENSIPP NSATDEVSSP EALASEEVEK
481 EQVVAETPVD EVKTPAPVVT EASSEESGNT ATAESIKGIS PALVKQLREE TGAGMMDCKN
541 ALSESEGDMV KAQEYLRKKG LASADKKASR ATSEGRIGAY IHDSRIGVLL EVNCETDFVS
601 RGDIFKELVD DLAMQVQYVS IEDIPEEIKQ KEKEIEMQRE DLLSKPENIR EKIVEGRISK
661 RLGEWALLEQ PYIKDDSVLV KDLVKQTVAT LGENIKVRRF VKFTLGEDN
//