LOCUS AEE85540.1 281 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetraspanin family protein protein.
ACCESSION CP002687-5227
PROTEIN_ID AEE85540.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G28770"
/gene_synonym="F16A16.120"
/gene_synonym="F16A16_120"
/inference="Similar to RNA sequence,
EST:INSD:H77056.1,INSD:BP854294.1,INSD:F13814.1,
INSD:DR220498.1,INSD:DR220488.1,INSD:BP611042.1,
INSD:DR220478.1,INSD:DR220484.1,INSD:ES171836.1,
INSD:BP574687.1,INSD:T42500.1,INSD:EL297267.1,
INSD:AV787981.1,INSD:BP804488.1,INSD:DR220494.1,
INSD:EH930239.1,INSD:ES131996.1,INSD:BP585881.1,
INSD:BP799639.1,INSD:AV439932.1,INSD:DR220477.1,
INSD:BP798641.1,INSD:EL097026.1,INSD:BP784545.1,
INSD:T88151.1,INSD:DR220483.1,INSD:AV788973.1,
INSD:BP599518.1,INSD:EL998892.1,INSD:BP668608.1,
INSD:BP803603.1,INSD:EH839298.1,INSD:BP803674.1,
INSD:ES001974.1,INSD:DR220492.1,INSD:DR220491.1,
INSD:DR220479.1,INSD:EL977621.1,INSD:EL051020.1,
INSD:BP566916.1,INSD:EG511068.1,INSD:AI992676.1,
INSD:EH986849.1,INSD:BP613187.1,INSD:DR220487.1,
INSD:H77055.1,INSD:BP566223.1,INSD:EH795436.1,
INSD:AV547391.1,INSD:BP595572.1,INSD:EL971079.1,
INSD:DR220493.1,INSD:BP608374.1,INSD:AV523720.1,
INSD:BP845880.1,INSD:EL087828.1,INSD:AU226057.1,
INSD:EH983875.1,INSD:DR370268.1,INSD:EL087882.1,
INSD:BP617159.1,INSD:AV791567.1,INSD:DR220495.1,
INSD:BP778334.1,INSD:BP600740.1,INSD:AV523298.1,
INSD:BP601808.1,INSD:BP653891.1,INSD:ES005733.1,
INSD:AV553896.1,INSD:EG511069.1,INSD:DR220490.1,
INSD:EL134244.1,INSD:DR220497.1,INSD:DR220482.1,
INSD:BP793027.1,INSD:F13845.1,INSD:DR220496.1,
INSD:AV553045.1,INSD:AV801772.1,INSD:BP857769.1,
INSD:EH988748.1,INSD:DR220481.1,INSD:DR220486.1,
INSD:BP584324.1,INSD:AU235380.1,INSD:BP844254.1,
INSD:BP788077.1,INSD:BP600074.1,INSD:DR220489.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX829228.1,INSD:AY085919.1,INSD:BX829242.1,
INSD:BX829241.1,INSD:BX827761.1,INSD:BX827872.1,
INSD:BX828017.1,INSD:AK227413.1,INSD:BT005982.1"
/note="Tetraspanin family protein; FUNCTIONS IN:
molecular_function unknown; LOCATED IN: plasma membrane,
vacuole, membrane; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST
Arabidopsis thaliana protein match is: Tetraspanin family
protein (TAIR:AT2G20230.1); Has 163 Blast hits to 163
proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 162; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink)."
/db_xref="TAIR:AT4G28770"
/db_xref="Araport:AT4G28770"
intron_pos 110:2 (1/5)
intron_pos 144:0 (2/5)
intron_pos 171:0 (3/5)
intron_pos 206:0 (4/5)
intron_pos 269:0 (5/5)
BEGIN
1 MRHNCCHVSF ASILKILNFL QAFIGISIII YSIWMLDQYN HHVPVDPPPS QPPAASSPDS
61 SYSFSNSIIE INSVSDSLKN PIDFVSGIVL GSGGGDSGFN LRSLDLPAPW FIYCFMAIGI
121 LVCIVTIIGF IAAEAINGCC LCFYSILKTL LIIIEAALVG FIVIDRHWEK DLPYDPTGEL
181 NSLRAFIEEN IDICKWVGIV VVAIQLLSLL LALVLRAMVS PRQSELDDED DFENPMSRAR
241 DNLLGPQANQ TSSGSSNIDN WRSRIREKYG LINSQSHTPS A
//