LOCUS AEE85490.1 891 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 26S proteasome regulatory subunit
S2 1B protein.
ACCESSION CP002687-5163
PROTEIN_ID AEE85490.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RPN1B"
/locus_tag="AT4G28470"
/gene_synonym="26S proteasome regulatory subunit S2 1B"
/gene_synonym="ATRPN1B"
/gene_synonym="F20O9.150"
/gene_synonym="F20O9_150"
/inference="Similar to RNA sequence,
EST:INSD:AV803026.1,INSD:EL115790.1,INSD:ES188335.1,
INSD:DR383143.1,INSD:T21500.1,INSD:EL997985.1,
INSD:ES169410.1,INSD:EL180651.1,INSD:ES031055.1,
INSD:EH974768.1,INSD:EG418911.1,INSD:AA586301.1,
INSD:EL085462.1,INSD:EL111224.1,INSD:DR369076.1,
INSD:CB259080.1,INSD:ES215816.1,INSD:DR359552.1,
INSD:EL014218.1,INSD:CK118626.1,INSD:BE523616.1,
INSD:ES141875.1,INSD:BP854167.1,INSD:ES113846.1,
INSD:ES102748.1,INSD:EL183146.1,INSD:ES150421.1,
INSD:ES185902.1,INSD:EG418912.1,INSD:ES104303.1,
INSD:AV546918.1,INSD:W43571.1,INSD:ES138686.1,
INSD:EG418913.1,INSD:AV827053.1,INSD:ES192330.1,
INSD:ES155832.1,INSD:CB259082.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY230829.1,INSD:AY069881.1"
/note="26S proteasome regulatory subunit S2 1B (RPN1B);
FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED
IN: protein catabolic process; LOCATED IN: proteasome
regulatory particle, base subcomplex, proteasome complex;
EXPRESSED IN: 6 plant structures; CONTAINS InterPro
DOMAIN/s: 26S proteasome regulatory complex, non-ATPase
subcomplex, Rpn1 subunit (InterPro:IPR016643),
Proteasome/cyclosome, regulatory subunit
(InterPro:IPR002015), Armadillo-type fold
(InterPro:IPR016024); BEST Arabidopsis thaliana protein
match is: 26S proteasome regulatory subunit S2 1A
(TAIR:AT2G20580.1); Has 1017 Blast hits to 967 proteins in
297 species: Archae - 0; Bacteria - 10; Metazoa - 372;
Fungi - 296; Plants - 141; Viruses - 0; Other Eukaryotes -
198 (source: NCBI BLink)."
/db_xref="TAIR:AT4G28470"
/db_xref="Araport:AT4G28470"
intron_pos 40:0 (1/22)
intron_pos 73:2 (2/22)
intron_pos 114:0 (3/22)
intron_pos 134:0 (4/22)
intron_pos 171:0 (5/22)
intron_pos 193:0 (6/22)
intron_pos 233:2 (7/22)
intron_pos 272:0 (8/22)
intron_pos 297:0 (9/22)
intron_pos 350:0 (10/22)
intron_pos 386:0 (11/22)
intron_pos 420:0 (12/22)
intron_pos 467:0 (13/22)
intron_pos 502:0 (14/22)
intron_pos 576:0 (15/22)
intron_pos 614:0 (16/22)
intron_pos 686:0 (17/22)
intron_pos 706:0 (18/22)
intron_pos 744:0 (19/22)
intron_pos 772:2 (20/22)
intron_pos 809:0 (21/22)
intron_pos 868:2 (22/22)
BEGIN
1 MAPVPDPNSV GGGAKRDEAT TKIPSKDSKK KDDKKEEDLS EEDLQLKQNL ELYVERVQDP
61 NPELQKIALE SMRKEIRDST SSMTSVPKPL KFLRPHYGVL KEFHAKMAES DLKKMLADIL
121 SVLALTMSAE GERESLNYRL NGSESDIGSW GHEYVRNLAG EIAKEYTIRQ GEESSIEDLM
181 DLVQQIVSFH MKHNAETEAV DLLMDVEDLD LLLEHVDNTN FRRTCNYLTS AAKYLPGPDD
241 MLVLDIAYMI YIKFAEYPNA LQIALFLDNM QYVKQVFTSC TDLVKKKQFC YMIARHGMTF
301 ELDQEMVAND EDKEALQDIV NNSKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG
361 PSVDSARQNL SATFVNAFVN AGFGQDKLMT VPSDSTSGSA GNWLFKNKEH GKTSAVASLG
421 MIQLWDVETG LGHLDKYFHS NDNPVVAGAL LGVGIVNCGI KNDCDPAFAL LSGYIDNEDS
481 SVRIGAIMGL GIAYAGSQND QIKIRLSPIL NDANAPLDVI AFAALSLGMI YVGSCNEEVA
541 QSIIFALMDR SEAELGEALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601 LSCAYAGTGN VLKVQDLLAQ CGEHLVKGDI HQGPAVIGLA MVAMSEELGL DMEIRSLERV
661 LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD SEVAMAAIIS LGLIGAGTNN
721 ARIAGMLRNL SSYYYKDASL LFCVRIAQGF VHMGKGLLTL NPFHSERLLL SPTALAGIVT
781 LLHACLDMKS IILGKYHYVL YFLVLAMQPR MMLTVDQSLK PISVPVRVGQ AVDVVGQAGR
841 PKTITGFQTH STPVLLAAGE RAELATEKYI PLSPILEGFV ILKENPDYRE E
//