LOCUS AEE85488.1 452 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana WD repeat and SOF domain-containing
protein 1 protein.
ACCESSION CP002687-5161
PROTEIN_ID AEE85488.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G28450"
/gene_synonym="F20O9.130"
/gene_synonym="F20O9_130"
/inference="Similar to RNA sequence,
EST:INSD:AV796279.1,INSD:DR219027.1,INSD:BP631570.1,
INSD:AV808829.1,INSD:EL114307.1,INSD:DR219026.1,
INSD:DR219029.1,INSD:BP849252.1,INSD:BP601130.1,
INSD:BP625618.1,INSD:DR353104.1,INSD:BP787493.1,
INSD:AV825919.1,INSD:BP593563.1,INSD:BP624348.1,
INSD:AV827350.1,INSD:DR382998.1,INSD:AV797937.1,
INSD:BX839231.1,INSD:DR370092.1,INSD:ES017709.1,
INSD:ES029586.1,INSD:ES169456.1,INSD:DR379212.1,
INSD:BP781568.1,INSD:BP633642.1,INSD:AV792923.1,
INSD:ES147323.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY143901.1,INSD:BX828806.1,INSD:AY045624.1,
INSD:AY062623.1,INSD:BX826972.1,INSD:BX828093.1,
INSD:AF372943.1"
/note="nucleotide binding;protein binding; CONTAINS
InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782),
WD40 repeat, conserved site (InterPro:IPR019775), WD40
repeat (InterPro:IPR001680), Sof1-like protein
(InterPro:IPR007287), G-protein beta WD-40 repeat, region
(InterPro:IPR020472), WD40 repeat-like-containing domain
(InterPro:IPR011046), WD40-repeat-containing domain
(InterPro:IPR017986), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Transducin/WD40 repeat-like superfamily protein
(TAIR:AT4G02730.1); Has 37337 Blast hits to 21127 proteins
in 676 species: Archae - 38; Bacteria - 5948; Metazoa -
14528; Fungi - 7710; Plants - 4379; Viruses - 0; Other
Eukaryotes - 4734 (source: NCBI BLink)."
/db_xref="TAIR:AT4G28450"
/db_xref="Araport:AT4G28450"
intron_pos 23:0 (1/15)
intron_pos 53:0 (2/15)
intron_pos 90:1 (3/15)
intron_pos 99:2 (4/15)
intron_pos 132:2 (5/15)
intron_pos 156:0 (6/15)
intron_pos 167:2 (7/15)
intron_pos 192:2 (8/15)
intron_pos 224:2 (9/15)
intron_pos 246:0 (10/15)
intron_pos 264:0 (11/15)
intron_pos 292:2 (12/15)
intron_pos 334:2 (13/15)
intron_pos 370:0 (14/15)
intron_pos 399:2 (15/15)
BEGIN
1 MKIKTLSRSV DEYTRERSQD LQRVFHNFDP SLRPMEKAVE YQRALTAAKL EKIFARPFVG
61 AMDGHRDGVS CMAKNPNYLK GIFSASMDGD IRLWDISSRR TVCQFPGHQG AVRGLTASTD
121 GNVLVSCGTD CTVRLWNVPR PSLEDSSISS ENFIEPSATY VWKNAFWAVD HQFEGDLFAT
181 AGAQLDIWNH NRSQPVQSFQ WGTDSVISVR FNPGEPNLLA TSASDRSITI YDLRLSSAAR
241 KIIMMTKTNS IAWNPMEPMN LTAANEDGSC YSFDGRKLDE AKCVHKDHVS AVMDIDFSPT
301 GREFVTGSYD RSVRIFPYNG GHSREIYHTK RMQRVFCVKY SCDATYVISG SDDTNLRLWK
361 AKASEQLGVI LPREQKKHEY NEAVKNRYKH LSEVKRIVRH RHLPKPIYKA MGIIRTVNDS
421 KRRKEARRKA HSAPGTVVTA PLRKRKIIKE VE
//