LOCUS AEE85487.1 153 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Nucleic acid-binding, OB-fold-like
protein protein.
ACCESSION CP002687-5160
PROTEIN_ID AEE85487.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G28440"
/gene_synonym="F20O9.120"
/gene_synonym="F20O9_120"
/inference="Similar to RNA sequence,
EST:INSD:BP587345.1,INSD:AV557403.1,INSD:DR202273.1,
INSD:AV791220.1,INSD:EH990634.1,INSD:DR202271.1,
INSD:AV559376.1,INSD:EH850662.1,INSD:ES036517.1,
INSD:EL136161.1,INSD:DR202278.1,INSD:DR202269.1,
INSD:EH969085.1,INSD:ES162928.1,INSD:DR369315.1,
INSD:DR202262.1,INSD:ES062370.1,INSD:DR202281.1,
INSD:DR202268.1,INSD:BP589756.1,INSD:DR202274.1,
INSD:EL228296.1,INSD:ES106149.1,INSD:BP796814.1,
INSD:DR202270.1,INSD:DR202260.1,INSD:DR202280.1,
INSD:EL152157.1,INSD:DR369316.1,INSD:DR202265.1,
INSD:DR376772.1,INSD:BP614137.1,INSD:ES005832.1,
INSD:DR202277.1,INSD:DR202279.1,INSD:BP833783.1,
INSD:ES185643.1,INSD:EL146583.1,INSD:EL989094.1,
INSD:DR202261.1,INSD:DR202263.1,INSD:DR202267.1,
INSD:EL972580.1,INSD:CK121082.1,INSD:DR202264.1,
INSD:EL981311.1,INSD:DR202272.1,INSD:DR202276.1,
INSD:DR369314.1,INSD:DR202266.1,INSD:EH956726.1,
INSD:AV802715.1,INSD:AV819941.1,INSD:EL983845.1,
INSD:BP641118.1,INSD:ES003058.1,INSD:AA712169.1,
INSD:EL198660.1,INSD:BP815266.1,INSD:DR202275.1,
INSD:ES187206.1,INSD:AV825410.1,INSD:EL260758.1,
INSD:BP609058.1,INSD:EL024214.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY050905.1,INSD:AY056432.1,INSD:AY088082.1,
INSD:BX826320.1,INSD:AY091407.1"
/note="Nucleic acid-binding, OB-fold-like protein;
CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Nucleic acid-binding,
OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana
protein match is: Nucleic acid-binding, OB-fold-like
protein (TAIR:AT2G33845.1); Has 214 Blast hits to 214
proteins in 47 species: Archae - 22; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 167; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink)."
/db_xref="TAIR:AT4G28440"
/db_xref="Araport:AT4G28440"
intron_pos 90:1 (1/1)
BEGIN
1 MATTGTAAVA TGTSTVKRKP VFVKVEQLKP GTTGHTLTVK VIEANIVVPV TRKTRPASSL
61 SRPSQPSRIV ECLIGDETGC ILFTARNDQV DLMKPGATVI LRNSRIDMFK GTMRLGVDKW
121 GRIEATGAAS FTVKEDNNLS LVEYELINVG GDQ
//