LOCUS AEE85475.1 562 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002687-5144
PROTEIN_ID AEE85475.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G28370"
/gene_synonym="F20O9.50"
/gene_synonym="F20O9_50"
/gene_synonym="FLY1"
/gene_synonym="FLYING SAUCER 1"
/inference="Similar to RNA sequence,
EST:INSD:AU230113.1,INSD:EG525782.1,INSD:EH851354.1,
INSD:AV823625.1,INSD:EL034078.1,INSD:EG504803.1,
INSD:CK117929.1,INSD:EH871139.1,INSD:AI998755.1,
INSD:EH978432.1,INSD:T04156.1,INSD:ES005306.1,
INSD:AV784628.1,INSD:AI998883.1,INSD:AU238892.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT020274.1,INSD:BX826353.1,INSD:AY096640.1,
INSD:AK229589.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Zinc finger, RING-type
(InterPro:IPR001841), Zinc finger, C3HC4 RING-type
(InterPro:IPR018957); BEST Arabidopsis thaliana protein
match is: RING/U-box superfamily protein
(TAIR:AT2G20650.2); Has 309 Blast hits to 308 proteins in
35 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi
- 25; Plants - 165; Viruses - 0; Other Eukaryotes - 45
(source: NCBI BLink)."
/db_xref="TAIR:AT4G28370"
/db_xref="Araport:AT4G28370"
intron_pos 47:0 (1/13)
intron_pos 71:1 (2/13)
intron_pos 114:0 (3/13)
intron_pos 152:2 (4/13)
intron_pos 173:0 (5/13)
intron_pos 195:1 (6/13)
intron_pos 221:1 (7/13)
intron_pos 274:0 (8/13)
intron_pos 294:0 (9/13)
intron_pos 325:1 (10/13)
intron_pos 381:1 (11/13)
intron_pos 491:0 (12/13)
intron_pos 530:0 (13/13)
BEGIN
1 MKKREHLGLG FFEWQIILWL SIWLAISQQA LGLRPIREKP RSWSDEWLFG RKQEAEVGPF
61 SAWNITGTYR GTWKFLNSLN SSSKFQDFQK ENGNSVVELV AVPTKITGVH YVQGVVVFHD
121 VFDNEQNVGG AQINLEGVYI WPFRQLRLVA NSGKESDSGQ EDNNLLSNPY HLLGIFSSQV
181 FQESPRDRLL KRKLSPVNEM EKHCNIEIAA QVSRVASSEN NGDKNYYHME GLMESPGVGD
241 DGDCFSPLLL NATSVNVEVY YNKAVNYTLM VTFVSFLQVL LLIRQMEHGN TQSGAAKVSI
301 VMIGQQAIMD AYLCLLHLTA GILVESLFNA FATAAFFKFV VFSIFEMRYL LAIWKATRPS
361 NSGEGWETMR RELSFLYSRF YGILLGGILI MYQFHNYMQP ILLLMYSFWI PQIVANVVRD
421 SRKPLHPYYI LGMTATRLAI PLYVFGCPHN FMRVEPNKVW CICLCTFMGL QAVILLLQHY
481 FGSRCFVPRQ MLPEKYNYHR RFNRDVSRTT DCVICMTAID LRQHTSDCMV TPCEHFFHSG
541 CLQRWMDIKM ECPTCRRSLP PA
//