LOCUS AEE85458.1 264 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana expansin B3 protein.
ACCESSION CP002687-5121
PROTEIN_ID AEE85458.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="EXPB3"
/locus_tag="AT4G28250"
/gene_synonym="ATEXPB3"
/gene_synonym="ATHEXP BETA 1.6"
/gene_synonym="expansin B3"
/gene_synonym="F26K10.130"
/gene_synonym="F26K10_130"
/inference="Similar to RNA sequence,
EST:INSD:EG516970.1,INSD:DR350231.1,INSD:DR350235.1,
INSD:EH940828.1,INSD:EH995136.1,INSD:EL222428.1,
INSD:AV822455.1,INSD:EL116963.1,INSD:DR350234.1,
INSD:DR350225.1,INSD:EH820972.1,INSD:EL263498.1,
INSD:BP786178.1,INSD:BP786771.1,INSD:DR350213.1,
INSD:AV831491.1,INSD:DR350220.1,INSD:EH979247.1,
INSD:EL120662.1,INSD:BP780798.1,INSD:EL263117.1,
INSD:EL004475.1,INSD:BP795681.1,INSD:BP581052.1,
INSD:DR350224.1,INSD:EG510059.1,INSD:EH836887.1,
INSD:DR350232.1,INSD:BP780746.1,INSD:EL294817.1,
INSD:AV802096.1,INSD:BP784819.1,INSD:AV549839.1,
INSD:BP782966.1,INSD:EL290365.1,INSD:DR350222.1,
INSD:BP779442.1,INSD:DR350227.1,INSD:CF772990.1,
INSD:EH952358.1,INSD:DR350218.1,INSD:DR350238.1,
INSD:DR350215.1,INSD:EL327825.1,INSD:DR350236.1,
INSD:BP638355.1,INSD:BP787671.1,INSD:EL251509.1,
INSD:EL982783.1,INSD:EL017184.1,INSD:EH843354.1,
INSD:DR350214.1,INSD:EL195548.1,INSD:DR354380.1,
INSD:EL007138.1,INSD:EL114192.1,INSD:DR350226.1,
INSD:BP777315.1,INSD:EL055288.1,INSD:AV814814.1,
INSD:EL970812.1,INSD:BP781100.1,INSD:EG476902.1,
INSD:EL293745.1,INSD:DR350228.1,INSD:DR350223.1,
INSD:EL231729.1,INSD:EH972374.1,INSD:EH959357.1,
INSD:DR350233.1,INSD:DR350219.1,INSD:EH858104.1,
INSD:CF652567.1,INSD:DR350229.1,INSD:ES177267.1,
INSD:DR350230.1,INSD:BP596166.1,INSD:AV555945.1,
INSD:DR375063.1,INSD:EH848322.1,INSD:ES136855.1,
INSD:EL068133.1,INSD:DR350221.1,INSD:EH961721.1,
INSD:DR350216.1,INSD:ES058633.1,INSD:EH882456.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY133801.1,INSD:AY039986.1,INSD:AY087228.1,
INSD:BX827016.1"
/note="expansin B3 (EXPB3); INVOLVED IN: response to
cyclopentenone, syncytium formation, plant-type cell wall
organization, unidimensional cell growth, plant-type cell
wall loosening; LOCATED IN: endomembrane system,
extracellular region; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pollen allergen, N-terminal
(InterPro:IPR014734), Rare lipoprotein A
(InterPro:IPR005132), Pollen allergen/expansin, C-terminal
(InterPro:IPR007117), Barwin-related endoglucanase
(InterPro:IPR009009), Major pollen allergen Lol pI
(InterPro:IPR005795), Expansin/Lol pI
(InterPro:IPR007118), Expansin 45, endoglucanase-like
(InterPro:IPR007112); BEST Arabidopsis thaliana protein
match is: expansin B1 (TAIR:AT2G20750.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G28250"
/db_xref="Araport:AT4G28250"
intron_pos 54:1 (1/3)
intron_pos 154:2 (2/3)
intron_pos 198:0 (3/3)
BEGIN
1 MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG
61 TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC SRRAVTVIIT DECPGCSKTS
121 THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL
181 VEFEDGEGDI GSMHIRQAGA REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA
241 TDVVPRNWAP KATYSSRLNF SPVL
//