LOCUS AEE85453.1 648 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana U3 small nucleolar RNA-associated-
like protein protein.
ACCESSION CP002687-5114
PROTEIN_ID AEE85453.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G28200"
/gene_synonym="F26K10.80"
/gene_synonym="F26K10_80"
/inference="Similar to RNA sequence,
EST:INSD:ES141304.1,INSD:T46623.1,INSD:EL982530.1,
INSD:AV782350.1,INSD:EG422650.1,INSD:EL990872.1,
INSD:BX839745.1,INSD:AV821804.1,INSD:AA404763.1,
INSD:BP843834.1,INSD:BE527964.1,INSD:EL998167.1,
INSD:BP612511.1,INSD:ES101244.1,INSD:EL043948.1,
INSD:BP633198.1,INSD:EL985187.1,INSD:BP843950.1,
INSD:BP829119.1,INSD:EL011461.1,INSD:EG422649.1,
INSD:BP661885.1,INSD:EL289455.1,INSD:ES082702.1,
INSD:ES000964.1,INSD:BP825141.1,INSD:ES042543.1,
INSD:EL137160.1,INSD:AV547494.1,INSD:BP790547.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK222070.1,INSD:BT008394.1,INSD:AY072310.1,
INSD:BX827478.1"
/note="FUNCTIONS IN: molecular_function unknown; INVOLVED
IN: RNA processing; LOCATED IN: intracellular; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: RNA-processing
protein, HAT helix (InterPro:IPR003107), U3 small
nucleolar RNA-associated protein 6 (InterPro:IPR013949);
Has 492 Blast hits to 480 proteins in 206 species: Archae
- 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants -
60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G28200"
/db_xref="Araport:AT4G28200"
intron_pos 132:0 (1/5)
intron_pos 357:0 (2/5)
intron_pos 504:0 (3/5)
intron_pos 561:2 (4/5)
intron_pos 623:0 (5/5)
BEGIN
1 MADVVQYRLE RMVDELDDLE RREIFTRAEI AEIVKQRRKF EYRLKRPSPL KEDFIAYIDY
61 EVKLDELRQL RRKSVARVTK KRKKKSVSDF AGVARIVEIY RLATMRYKGD INLWFRYLEF
121 CKQKRHGRMK KALAQAIRFH PKVAGVWIYA ASWEFDRNLN VTAARALMLN GLRVCSNSED
181 LWVEYLRMEL TFLNKLKARK VALGEDKGSL VRDTKTVEDE QWKDENKELF MSLDEKEGNE
241 KEENDEDSIV EDVEDVTEKV DFLKEKGSNV LQTIYSGAVE AIPSSFDLRK RFLEILEATD
301 LAHSDEMRNT ILSDLKRDFC NEPEYWNWLA RHEMSGCISN EAGLEFANPQ MQKAIQVFEE
361 GLQTVTSSSM FEIYINFLME AIVQSNGDEN EISSLSNPII SHIINVYQKA DETGCLTEEL
421 ADEYVSLYLK LEKTHEAQKL AEKLCSEKFA GSAKLWLSRV SIEIRSLSEN SSPSKADFQT
481 VFELLSNALR KVPISESESL WLMAFNFFAH QRTYLDKLVE MSILSATKSH GSDHVFSLAS
541 TVVKFVLETK GAHSARKIYK RFLALPGPSL VLYKGCIEIE TNLISVGDKD GLSNARKLYD
601 SAVASYGQDV ELWKNYYSLE TKLGTSETAN GVYWRARKTL NESADFIV
//