LOCUS AEE85413.1 148 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ubiquitin conjugating enzyme 9 protein.
ACCESSION CP002687-5062
PROTEIN_ID AEE85413.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="UBC9"
/locus_tag="AT4G27960"
/gene_synonym="T13J8.70"
/gene_synonym="T13J8_70"
/gene_synonym="ubiquitin conjugating enzyme 9"
/gene_synonym="UBIQUITIN-PROTEIN LIGASE"
/inference="Similar to RNA sequence,
EST:INSD:BP627263.1,INSD:CF651565.1,INSD:ES120738.1,
INSD:EH934106.1,INSD:BP654478.1,INSD:EH859627.1,
INSD:EH870794.1,INSD:ES200218.1,INSD:ES031636.1,
INSD:ES102183.1,INSD:EH926903.1,INSD:BP580126.1,
INSD:EH844738.1,INSD:EL974365.1,INSD:BP578474.1,
INSD:EL170449.1,INSD:EL180959.1,INSD:R65353.1,
INSD:EL172845.1,INSD:BP621691.1,INSD:Z18473.1,
INSD:BP584615.1,INSD:T46765.1,INSD:ES064219.1,
INSD:EL236667.1,INSD:EL271532.1,INSD:EG445509.1,
INSD:BP573280.1,INSD:EH891691.1,INSD:BP600483.1,
INSD:ES201654.1,INSD:EL208551.1,INSD:BP563951.1,
INSD:AV821644.1,INSD:BP780162.1,INSD:ES053835.1,
INSD:ES163441.1,INSD:BP817447.1,INSD:BP621764.1,
INSD:BP599728.1,INSD:EL244337.1,INSD:BP570566.1,
INSD:ES081309.1,INSD:EL174748.1,INSD:EL228911.1,
INSD:EH970468.1,INSD:ES124158.1,INSD:EL253705.1,
INSD:ES154493.1,INSD:ES091556.1,INSD:ES009920.1,
INSD:CF653110.1,INSD:ES101461.1,INSD:EL013672.1,
INSD:EL292868.1,INSD:EL167129.1,INSD:EH873574.1,
INSD:ES109856.1,INSD:EH981716.1,INSD:DR355003.1,
INSD:AV531110.1,INSD:ES088934.1,INSD:EG445498.1,
INSD:BP572249.1,INSD:AV782161.1,INSD:AV526780.1,
INSD:EL204477.1,INSD:ES143704.1,INSD:EL231585.1,
INSD:ES153214.1,INSD:EH864070.1,INSD:ES034315.1,
INSD:EH933728.1,INSD:AV534450.1,INSD:BP616752.1,
INSD:EL174140.1,INSD:EH936726.1,INSD:DR355004.1,
INSD:ES184473.1,INSD:EH863678.1,INSD:R65363.1,
INSD:EL256371.1,INSD:BP568827.1,INSD:EH902714.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY142644.1,INSD:X72626.1,INSD:AY080741.1"
/note="ubiquitin conjugating enzyme 9 (UBC9); CONTAINS
InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like
(InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2
(InterPro:IPR000608); BEST Arabidopsis thaliana protein
match is: ubiquitin-conjugating enzyme 10
(TAIR:AT5G53300.4); Has 10699 Blast hits to 10660 proteins
in 400 species: Archae - 0; Bacteria - 4; Metazoa - 4650;
Fungi - 2335; Plants - 1940; Viruses - 26; Other
Eukaryotes - 1744 (source: NCBI BLink)."
/db_xref="TAIR:AT4G27960"
/db_xref="Araport:AT4G27960"
intron_pos 24:1 (1/3)
intron_pos 67:0 (2/3)
intron_pos 102:0 (3/3)
BEGIN
1 MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY
61 PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV
121 PEIAHMYKTD KNKYESTART WTQKYAMG
//