LOCUS AEE85408.1 1027 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SET domain protein 16 protein.
ACCESSION CP002687-5057
PROTEIN_ID AEE85408.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="SDG16"
/locus_tag="AT4G27910"
/gene_synonym="ATX4"
/gene_synonym="SET domain protein 16"
/gene_synonym="T13J8.20"
/gene_synonym="T13J8_20"
/inference="Similar to RNA sequence,
EST:INSD:CB518281.1,INSD:BG459492.1,INSD:AV524242.1,
INSD:ES118747.1,INSD:EG524095.1,INSD:CF773382.1,
INSD:AV530109.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY049754.1"
/note="SET domain protein 16 (SDG16); FUNCTIONS IN: zinc
ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SET
domain (InterPro:IPR001214), Zinc finger, PHD-type,
conserved site (InterPro:IPR019786), Zinc finger, PHD-type
(InterPro:IPR001965), Post-SET domain
(InterPro:IPR003616), Zinc finger, FYVE/PHD-type
(InterPro:IPR011011), PWWP (InterPro:IPR000313), Zinc
finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis
thaliana protein match is: SET domain group 29
(TAIR:AT5G53430.1); Has 6853 Blast hits to 6701 proteins
in 480 species: Archae - 2; Bacteria - 423; Metazoa -
3089; Fungi - 828; Plants - 1148; Viruses - 0; Other
Eukaryotes - 1363 (source: NCBI BLink)."
/db_xref="TAIR:AT4G27910"
/db_xref="Araport:AT4G27910"
intron_pos 261:0 (1/22)
intron_pos 279:2 (2/22)
intron_pos 351:0 (3/22)
intron_pos 394:0 (4/22)
intron_pos 417:0 (5/22)
intron_pos 440:0 (6/22)
intron_pos 470:2 (7/22)
intron_pos 501:2 (8/22)
intron_pos 547:0 (9/22)
intron_pos 581:1 (10/22)
intron_pos 614:2 (11/22)
intron_pos 656:1 (12/22)
intron_pos 705:0 (13/22)
intron_pos 740:0 (14/22)
intron_pos 761:2 (15/22)
intron_pos 832:0 (16/22)
intron_pos 861:0 (17/22)
intron_pos 881:0 (18/22)
intron_pos 911:0 (19/22)
intron_pos 940:0 (20/22)
intron_pos 965:0 (21/22)
intron_pos 998:2 (22/22)
BEGIN
1 MIIKRKFKTQ IPSLERCKLG NESRKKKRKL NLGGGGYYYP LNLLGEIAAG IVPGNGRNGF
61 SASWCTEVTK PVEVEESLSK RRSDSGTVRD SPPAEVSRPP LVRTSRGRIQ VLPSRFNDSV
121 LDNWRKDSKS DCDLEEEEIE CRNEKVVSFR VPKATNLKSK ELDRKSKYSA LCKEERFHEQ
181 HNDEARARVD EKLPNKKGTF GPENFYSGDL VWAKSGRNEP FWPAIVIDPM TQAPELVLRS
241 CIPDAACVVF FGHSGNENER DYAWVRRGMI FPFVDYVARF QEQPELQGCK PGNFQMALEE
301 AFLADQGFTE KLMHDIHLAA GNSTFDDSFY RWIQETAVSN QELNNNAPRQ GLLKKHRNPL
361 ACAGCETVIS FEMAKKMKDL IPGDQLLCKP CSRLTKSKHI CGICKKIRNH LDNKSWVRCD
421 GCKVRIHAEC DQISDRHLKD LRETDYYCPT CRAKFNFDLS DSEKQNSKSK VAKGDGQMVL
481 PDKVIVVCAG VEGVYFPRLH LVVCKCGSCG PKKKALSEWE RHTGSKSKNW KTSVKVKSSK
541 LALEDWMMNL AELHANATAA KVPKRPSIKQ RKQRLLAFLS ETYEPVNAKW TTERCAVCRW
601 VEDWDYNKII ICNRCQIAVH QECYGARHVR DFTSWVCKAC ERPDIKRECC LCPVKGGALK
661 PTDVETLWVH VTCAWFQPEV CFASEEKMEP AVGILSIPST NFVKICVICK QIHGSCTQCC
721 KCSTYYHAMC ASRAGYRMEL HCLEKNGQQI TKMVSYCAYH RAPNPDNVLI IQTPSGAFSA
781 KSLVQNKKKG GSRLISLIRE DDEAPAENTI TCDPFSAARC RVFKRKINSK KRIEEEAIPH
841 HTRGPRHHAS AAIQTLNTFR HVPEEPKSFS SFRERLHHLQ RTEMDRVCFG RSGIHGWGLF
901 ARRNIQEGEM VLEYRGEQVR GSIADLREAR YRRVGKDCYL FKISEEVVVD ATDKGNIARL
961 INHSCTPNCY ARIMSVGDEE SRIVLIAKAN VAVGEELTYD YLFDPDEAEE LKVPCLCKAP
1021 NCRKFMN
//