LOCUS AEE85381.1 303 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana vacuolar protein sorting 26B protein.
ACCESSION CP002687-5017
PROTEIN_ID AEE85381.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="VPS26B"
/locus_tag="AT4G27690"
/gene_synonym="T29A15.180"
/gene_synonym="T29A15_180"
/gene_synonym="vacuolar protein sorting 26B"
/inference="Similar to RNA sequence,
EST:INSD:BP595788.1,INSD:AV784214.1,INSD:EL170836.1,
INSD:Z37712.1,INSD:CF773533.1,INSD:N65360.1,
INSD:BP611229.1,INSD:EL980609.1,INSD:DR377149.1,
INSD:AV797901.1,INSD:BP588534.1,INSD:ES040010.1,
INSD:AA586046.1,INSD:DR303639.1,INSD:EH921161.1,
INSD:ES101374.1,INSD:AV812758.1,INSD:BP593415.1,
INSD:EL231398.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX829346.1,INSD:BT011888.1,INSD:AY094409.1,
INSD:BX829000.1"
/note="vacuolar protein sorting 26B (VPS26B); FUNCTIONS
IN: molecular_function unknown; INVOLVED IN: intracellular
protein transport, vacuolar transport, retrograde
transport, endosome to Golgi; LOCATED IN: retromer
complex; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Vacuolar protein sorting-associated protein 26
(InterPro:IPR005377); BEST Arabidopsis thaliana protein
match is: vacuolar protein sorting 26A (TAIR:AT5G53530.1);
Has 795 Blast hits to 794 proteins in 227 species: Archae
- 0; Bacteria - 0; Metazoa - 406; Fungi - 146; Plants -
106; Viruses - 0; Other Eukaryotes - 137 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G27690"
/db_xref="Araport:AT4G27690"
intron_pos 2:0 (1/10)
intron_pos 27:0 (2/10)
intron_pos 52:0 (3/10)
intron_pos 76:1 (4/10)
intron_pos 91:1 (5/10)
intron_pos 128:2 (6/10)
intron_pos 151:0 (7/10)
intron_pos 166:0 (8/10)
intron_pos 184:2 (9/10)
intron_pos 243:1 (10/10)
BEGIN
1 MNYLLGAFKP ACNISITFSD GKNRKQVPMK KENGQTALVP LFHSQDTISG KVCIEPYQGK
61 KVEHNGVKVE LLGQIEMYFD RGNFYDFTSL VRELDVPGEI YERKTYPFEF PTVEMPYETY
121 NGVNVRLRYV LKVTVTRGYA GSILEYQELV VRNYAPLPDI NNSIKMEVGI EDCLHIEFEY
181 NKSKYHLKDV ILGKIYFLLV RIKMKNMDLE IRRRESTGAG ANTHVETETL AKFELMDGTP
241 VRGESIPVRL FLAPYDLTPT HRNINNKFSV KYYLNLVLVD EEDRRYFKQQ EITLYRLKED
301 ASS
//