LOCUS AEE85320.1 130 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Calcium-binding EF-hand family protein
protein.
ACCESSION CP002687-4924
PROTEIN_ID AEE85320.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G27280"
/gene_synonym="M4I22.90"
/gene_synonym="M4I22_90"
/inference="Similar to RNA sequence,
EST:INSD:CB254821.1,INSD:EG529107.1,INSD:DR310445.1,
INSD:DR207067.1,INSD:CB252471.1,INSD:DR207079.1,
INSD:EL234702.1,INSD:EG455131.1,INSD:DR207062.1,
INSD:DR207071.1,INSD:DR207085.1,INSD:CB252362.1,
INSD:DR207078.1,INSD:DR372048.1,INSD:DR207093.1,
INSD:EL195255.1,INSD:BE845375.1,INSD:DR207086.1,
INSD:EH864859.1,INSD:AV786687.1,INSD:CB252056.1,
INSD:EH943254.1,INSD:CB252433.1,INSD:CB255527.1,
INSD:DR207090.1,INSD:DR207084.1,INSD:EL053563.1,
INSD:DR310444.1,INSD:DR207075.1,INSD:AV820879.1,
INSD:DR207060.1,INSD:EH831787.1,INSD:EG439093.1,
INSD:EH912578.1,INSD:CB255486.1,INSD:AV827035.1,
INSD:CD530375.1,INSD:DR207065.1,INSD:CB255255.1,
INSD:BE662981.1,INSD:CB255205.1,INSD:DR207081.1,
INSD:DR207069.1,INSD:DR207063.1,INSD:EL159748.1,
INSD:CB256312.1,INSD:CB253180.1,INSD:DR207076.1,
INSD:CB264482.1,INSD:DR207066.1,INSD:CB254393.1,
INSD:CB254023.1,INSD:DR207077.1,INSD:EL093948.1,
INSD:DR207092.1,INSD:DR207089.1,INSD:AV797081.1,
INSD:DR207083.1,INSD:EH827907.1,INSD:EG518922.1,
INSD:DR207059.1,INSD:DR310443.1,INSD:DR207073.1,
INSD:DR372749.1,INSD:CD531565.1,INSD:BP855379.1,
INSD:DR207068.1,INSD:DR310447.1,INSD:DR207064.1,
INSD:CB254372.1,INSD:DR207061.1,INSD:CD531515.1,
INSD:EH867124.1,INSD:EG455129.1,INSD:DR207091.1,
INSD:EL297058.1,INSD:AA720093.1,INSD:DR207094.1,
INSD:DR207088.1,INSD:EG439094.1,INSD:EL018559.1,
INSD:EH869266.1,INSD:DR310446.1,INSD:EL189932.1,
INSD:DR207074.1,INSD:AV815178.1,INSD:EG438629.1,
INSD:DR207095.1,INSD:DR207082.1,INSD:DR207080.1,
INSD:DR207087.1,INSD:DR207070.1,INSD:EL179329.1,
INSD:EG529108.1,INSD:EL236936.1,INSD:DR207072.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX829348.1,INSD:AY085115.1,INSD:BX841612.1,
INSD:AY098973.1,INSD:AY058165.1,INSD:AY363867.1"
/note="Calcium-binding EF-hand family protein; FUNCTIONS
IN: calcium ion binding; INVOLVED IN: response to
karrikin; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
EF-Hand 1, calcium-binding site (InterPro:IPR018247),
EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain
(InterPro:IPR011992); BEST Arabidopsis thaliana protein
match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink)."
/db_xref="TAIR:AT4G27280"
/db_xref="Araport:AT4G27280"
BEGIN
1 MASPKSPTRP TQQNPQPNFH DFLPTMAGNL GGEGLIGELC NGFELLMDRE KGVITFESLR
61 RNAAAVLGLG DLTDEDVRCM IKEGDFDCDG ALNQMEFCVL MFRLSPDLME ASRCLVTEVI
121 EEEFGFTRRH
//