LOCUS AEE85294.1 453 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box/RNI-like superfamily protein protein.
ACCESSION CP002687-4891
PROTEIN_ID AEE85294.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G27050"
/gene_synonym="F10M23.390"
/gene_synonym="F10M23_390"
/inference="Similar to RNA sequence,
EST:INSD:EH824356.1,INSD:ES185968.1,INSD:ES053124.1,
INSD:AV439899.1,INSD:AV811760.1,INSD:AV792253.1,
INSD:ES185924.1,INSD:EL986516.1,INSD:DR292613.1,
INSD:ES119174.1,INSD:EH851064.1,INSD:ES183143.1,
INSD:EL137739.1,INSD:DR292614.1,INSD:ES126992.1,
INSD:EL333178.1,INSD:ES064632.1,INSD:EH990953.1,
INSD:EL975731.1,INSD:ES140245.1,INSD:ES037942.1,
INSD:EL149206.1,INSD:EL121137.1,INSD:EL995337.1,
INSD:DR292616.1,INSD:EH832670.1,INSD:ES014936.1,
INSD:ES188264.1,INSD:DR379657.1,INSD:EL978954.1,
INSD:ES057171.1,INSD:EL207705.1,INSD:EL194182.1,
INSD:AV808887.1,INSD:Z26450.1,INSD:ES211748.1,
INSD:DR292615.1,INSD:ES162033.1,INSD:EH899119.1,
INSD:ES212870.1,INSD:ES038192.1,INSD:EL197475.1,
INSD:AV556181.1,INSD:EH865757.1,INSD:ES142315.1,
INSD:CB259433.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT000114.1"
/note="F-box/RNI-like superfamily protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
F-box domain, cyclin-like (InterPro:IPR001810), F-box
domain, Skp2-like (InterPro:IPR022364), FBD-like
(InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box/RNI-like superfamily protein
(TAIR:AT2G29930.3); Has 1798 Blast hits to 1757 proteins
in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 1798; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink)."
/db_xref="TAIR:AT4G27050"
/db_xref="Araport:AT4G27050"
intron_pos 311:0 (1/2)
intron_pos 357:0 (2/2)
BEGIN
1 MDTDLISNLP DDVLGKILSL VPTKLAAATS VLSKRWRNLL PLVDSLDFDE TMLFYPDNKD
61 GEDEASSYES GQRRRHSFSH FVDKTLALLS NAPLTEKFSL KCYHEDDGAR INRWIRTALE
121 RGCLELNLEA ANYLPIDSQY FTSNTLVKLT ISDGFYPGGH LLPFGGVFFP ALKTLTLVSV
181 CFTSVEMINF FIHGCPALEE LFLCVWMQYM SSPNVKRVTI TSDFDDDIQR PSMVLKTPSL
241 VYLDYSSYVA GNYYVVLDSL VEARLDLRLY EPIIYDEDGL WNAEVFGNIT NLIEAIRTIK
301 ILHLSPSSLE VFYYCCDLPV LEDLVNLSIE SDKEKGWEVM PRLLNKSPNL QTLVVKGLVH
361 RVTYCCGDAC ACIRMKDREI VSCLSRCRVK VLKILGYGGS FRELKQMRHF LGKLKCLETV
421 KVGVKEGSKK SNYLVANVMA LPRVSSKCKI QFI
//