LOCUS AEE85289.1 250 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana EAP30/Vps36 family protein protein.
ACCESSION CP002687-4885
PROTEIN_ID AEE85289.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="VPS22"
/locus_tag="AT4G27040"
/gene_synonym="F10M23.380"
/gene_synonym="F10M23_380"
/inference="Similar to RNA sequence,
EST:INSD:EG447072.1,INSD:ES157729.1,INSD:BP793167.1,
INSD:EL242092.1,INSD:EG447059.1,INSD:EG447058.1,
INSD:AA585771.1,INSD:EG447074.1,INSD:EG447070.1,
INSD:EG447048.1,INSD:EH850601.1,INSD:EL337597.1,
INSD:EH814084.1,INSD:EG496995.1,INSD:EG447078.1,
INSD:EH847519.1,INSD:EL013047.1,INSD:AA712589.1,
INSD:BP602237.1,INSD:EG447079.1,INSD:EG447062.1,
INSD:ES079656.1,INSD:EG447075.1,INSD:EG447080.1,
INSD:ES037675.1,INSD:AV822083.1,INSD:ES032987.1,
INSD:EG447071.1,INSD:BP592832.1,INSD:EH852063.1,
INSD:AV782720.1,INSD:EG447009.1,INSD:EH899774.1,
INSD:ES102592.1,INSD:ES023284.1,INSD:EL203643.1,
INSD:EG447060.1,INSD:EG447063.1,INSD:EG447055.1,
INSD:EG447066.1,INSD:EG447057.1,INSD:EG447069.1,
INSD:EH797237.1,INSD:EH900445.1,INSD:EL104318.1,
INSD:EG446987.1,INSD:EG447047.1,INSD:EL045956.1,
INSD:AV557160.1,INSD:EL261168.1,INSD:AI993807.1,
INSD:EG447052.1,INSD:N97203.1,INSD:EG447011.1,
INSD:EG446950.1,INSD:EG447081.1,INSD:EH821448.1,
INSD:ES051941.1,INSD:EG447064.1,INSD:EG447049.1,
INSD:EG446988.1,INSD:BP640955.1,INSD:EL976001.1,
INSD:BP790802.1,INSD:ES059895.1,INSD:EG447050.1,
INSD:EG446952.1,INSD:EL044945.1,INSD:EG447077.1,
INSD:EH914359.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX826828.1,INSD:AY299264.1,INSD:BT020552.1"
/note="VPS22; CONTAINS InterPro DOMAIN/s: ESCRT-2 complex,
Snf8 (InterPro:IPR016689), EAP30 (InterPro:IPR007286); Has
30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT4G27040"
/db_xref="Araport:AT4G27040"
intron_pos 18:0 (1/6)
intron_pos 55:0 (2/6)
intron_pos 100:1 (3/6)
intron_pos 152:0 (4/6)
intron_pos 188:0 (5/6)
intron_pos 218:0 (6/6)
BEGIN
1 MRRRPGIGGL QKAAAARDQY RLLGENVAKL RTDMMKEQLS TFRSQLEEFA RKHKNDIRKN
61 PAFRAQFHEM CANIGVDPLA SNKGFWAELL GIGDFYYELG VQIIEVCMLT RSHNGGLISL
121 QELCNHLRQR RKKDREAVTE DDCLRAISKL KVLGSGFEVI TIGKKKLVRS VPTELNKDHN
181 QILELAQGQG FVIVEEVQRR LSWTSGRVID ALETLLEEGL AMIDNGHKDG KCRYWFPCVS
241 SVYSSIGSDT
//