LOCUS AEE85284.2 2574 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ribosome 60S biogenesis amino-terminal
protein protein.
ACCESSION CP002687-4877
PROTEIN_ID AEE85284.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="EMB2788"
/locus_tag="AT4G27010"
/gene_synonym="EMBRYO DEFECTIVE 2788"
/gene_synonym="F10M23.350"
/gene_synonym="F10M23_350"
/inference="Similar to RNA sequence,
EST:INSD:EH799245.1,INSD:EL314497.1"
/note="INVOLVED IN: biological_process unknown; LOCATED
IN: cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 10 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal
(InterPro:IPR021714); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G72270.1); Has 312
Blast hits to 226 proteins in 103 species: Archae - 0;
Bacteria - 2; Metazoa - 129; Fungi - 90; Plants - 83;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink)."
/db_xref="TAIR:AT4G27010"
/db_xref="Araport:AT4G27010"
intron_pos 13:1 (1/15)
intron_pos 380:2 (2/15)
intron_pos 625:0 (3/15)
intron_pos 788:1 (4/15)
intron_pos 838:0 (5/15)
intron_pos 1956:2 (6/15)
intron_pos 2005:0 (7/15)
intron_pos 2024:2 (8/15)
intron_pos 2033:0 (9/15)
intron_pos 2101:0 (10/15)
intron_pos 2169:0 (11/15)
intron_pos 2218:0 (12/15)
intron_pos 2335:0 (13/15)
intron_pos 2479:1 (14/15)
intron_pos 2506:2 (15/15)
BEGIN
1 MAESISSDLE DQGMVVDGGN RDVEVGKIPV MAFRPSHEAK LRELLHNICL HEIKLCSDAA
61 KEFVKLLKGE TGGDLLRLYF QSSPNFAELL EAWKLRHEKQ GLSYIFSLIQ TILSHPEGKD
121 RSTDIGRAID QFGRLLVEEK LDDIYKELNS KEGKQQSAAL SLLASIVRRG PGMASEIAKK
181 FDFKGFAKLA EYNTQGTEKV KKHSTRKAFV GFAISFLEVG KPGLLSSVLN KKEMYSKVLP
241 GLGKDDDDTV ASVLSTLKDK ILVEESLISP GLRSVLFGIV TLKHLASISA REDAGIVNEL
301 AHDVLVKVCT DPSNGLMPDA KRKLRGNSDR LLMLMKGLRA AEIGYHRDLL LAIVRGRPSL
361 ASDFLDEFPY NVEDFSSPSW FSSISLAANL VSSVRTSCSF DFLNPDQRAT PPSGGSDVQT
421 IMKCICPRPF SRSLITKGML HSDFLVKHGT LRFLLETLRL LDSFLTAWNL CSSHRCSVEQ
481 IQISLERNVM GEVSSFFPDS QVLLIVLKSL DGSSGTQKLS LKREAELDSG LVGRKKRIKR
541 SEKDVLEEEA VDIVIGGVGS DKDIFLAEDN MDAHMTDQED AEKEYLGIVS DIWISELCSN
601 PIDSVEEAEM CFHIKLLDAL KIYVRAVPNE LEGSFDIFMK FLSNSFGMPV ELQRALLSLL
661 SEYISWTPKS QSDRGPTRIP PLMHKHLRVF INLLLFSPHN GVKDLAYNLA VAAMNSTGAF
721 ENNPSEIGAW FLFLPCFEKI KLPLELQEAV QSMSSVVVSF LCDAVSTVGN NLFKHWDIVR
781 SSLSHLKGVS IGFSPLIICL LQKCVRLLNS ESKTSLPEKS AISLYVCSTL KYLLQTQVDS
841 KLLSCLIQSV LSEVVDESKD SLCEWRPLRM LLCFSQSLSN EKPIILHSRR TTGLPADSSF
901 AETLDEIKRL VRSISPDEIA GIVKAFSSAL ICATPESILQ NFASVMDVSW AFYGTPFSFL
961 QSITFLEENF LGNLSKLSPD LFASGSEFTG SGNLCEGTVD SEIDFSGHSS VTEEIRSKMD
1021 NRDMESSAFS IFLKQAPFPV LLNAIMSMDI SCLPEFPRIS ELLLLKVSQP KSGSIDSNIQ
1081 LILFWLFQIR SSYKVQPAPV LHQLSEICLR LMKNLFSQIS EPELVSGPSS NKLPASFAKW
1141 KHQVAETVLC HPVVMALLES PLDCGTLPPV QNVEIFSETS LTMGRLVFSE IDQHILNLLV
1201 STCEHFLFDE KPPNLWKEDL RKNKSIIAFK DLVERLLLEF RVKFELCVGS QSYVSLLQPA
1261 QLIHALLRFI SPFKLFNIAH SMLSKIDEEG LTSPNSSIIL SLGLGIAGGA FEMLVLYSHQ
1321 PTAKRGVYDL LWELEEKNYA SNIIEKVYSM ACKFSTSLDL DSADICLLKV CGGIFRGKHN
1381 QNYAVDPLVL KISLIVGRTP EDLIIHCINR ASITRAKILF YLVESSPLHL LVFGHFFFSM
1441 LSKKQDDSAL TDDQFIMLLP AVLSYLTSVI AKLEKPCNRC LDITSVYSNI LINGFLQWPR
1501 FLARCIFEEK HEEILLSTTE DMETMFNASL IGKAVRMFQY HFSLTESPTK EDDLFKVFNS
1561 MFPLSSTGKE MLDYEIKEVD VQSVDQILNV AIRVVAKVTV SRICLFPEDS SMCHLKRAAG
1621 TCVKESSSKI GCNRAILSKP LLDALVNSWQ CVVKKSDGSF KGNYEGKQDR CWSLCKSLEN
1681 FILRSILQFL ESMCEELVQL DSLPFLDRLM KSVLLYRFED SKTLKILREI FSLLSRGKYS
1741 YAPYIQRLIY HSRFTPTISS LSISSSNTGE LFRPVSSILN HLIILSPDSV RVKRCCLEAP
1801 KYAKQLEIVK ILRVLLSNCG KDSGMKELLS DLHFLLLCSY GATLREIDLE IYKLMHDIKL
1861 IEAEQTLNVS ETDYLWGKAA LKIREGLSQD ASDVCQVDLV EDVRQGLIKE NLCVDPKICA
1921 LTVLFFPYQR TTEKSENFYL YDDPINEVPV FSFNFQLIVL GYIEPVEFAS LGLLAVAFVS
1981 MSSADLGMRK LGYETLQIFL DALEMGKDIV EGNILAFPIC TEDFNWFCKG LMNCRKNKHV
2041 TGLRLLLMYV QNGVEEPWQR IPTVSAIFAA ETSMILLDPS HEHYVPINKL LKSSSTLKLR
2101 GIPLFHDFFW SSAVNFRSQR FWELRLVYLG LKSDDDVQIY IKNSILETVI SFSSSPLADD
2161 ETKRLILQVV RKSVKFHKIA RHLVENCGLF SWCSSFISNF TTKPIGDKDL HLVVVLEIIT
2221 DVLASRNITE WLQRFGLEGL MEISSRLYKL LGGGLVSVQE NGTSVDLILQ ILSATLKISQ
2281 KRNMYQPHFT ITIEGIFQLF EGVANFGSPQ VEASAESGLI TILMSTPPVD ILCMDVDKLR
2341 RFLLWGTSTA LKSDFKKGSK PSESHEDTKI LIEGPQEETM VAKFLRWLSA SVILGKSYSK
2401 ASDSDPTFLS KTKPETLLTS LEYFKKRNLE DSMQNSEHII GEVIVHLQQF LSTNYMFLLP
2461 SVVFALSLML LHNDLGTGES DGDYKLIKSL CSKISSPPEA IPGWRWSYYQ AWRDLSSEQA
2521 TDLDKINELH ACQHLLLIFS AMLGETPQES QQVLLRKSFD MSHVFEWERS LVET
//