LOCUS AEE85283.1 2374 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ribosome 60S biogenesis amino-terminal
protein protein.
ACCESSION CP002687-4878
PROTEIN_ID AEE85283.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="EMB2788"
/locus_tag="AT4G27010"
/gene_synonym="EMBRYO DEFECTIVE 2788"
/gene_synonym="F10M23.350"
/gene_synonym="F10M23_350"
/inference="Similar to RNA sequence,
EST:INSD:EH799245.1,INSD:EL314497.1"
/note="CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis
N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G72270.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT4G27010"
/db_xref="Araport:AT4G27010"
intron_pos 208:2 (1/12)
intron_pos 453:0 (2/12)
intron_pos 616:1 (3/12)
intron_pos 666:0 (4/12)
intron_pos 1784:2 (5/12)
intron_pos 1833:0 (6/12)
intron_pos 1901:0 (7/12)
intron_pos 1969:0 (8/12)
intron_pos 2018:0 (9/12)
intron_pos 2135:0 (10/12)
intron_pos 2279:1 (11/12)
intron_pos 2306:2 (12/12)
BEGIN
1 MASEIAKKFD FKGFAKLAEY NTQGTEKVKK HSTRKAFVGF AISFLEVGKP GLLSSVLNKK
61 EMYSKVLPGL GKDDDDTVAS VLSTLKDKIL VEESLISPGL RSVLFGIVTL KHLASISARE
121 DAGIVNELAH DVLVKVCTDP SNGLMPDAKR KLRGNSDRLL MLMKGLRAAE IGYHRDLLLA
181 IVRGRPSLAS DFLDEFPYNV EDFSSPSWFS SISLAANLVS SVRTSCSFDF LNPDQRATPP
241 SGGSDVQTIM KCICPRPFSR SLITKGMLHS DFLVKHGTLR FLLETLRLLD SFLTAWNLCS
301 SHRCSVEQIQ ISLERNVMGE VSSFFPDSQV LLIVLKSLDG SSGTQKLSLK REAELDSGLV
361 GRKKRIKRSE KDVLEEEAVD IVIGGVGSDK DIFLAEDNMD AHMTDQEDAE KEYLGIVSDI
421 WISELCSNPI DSVEEAEMCF HIKLLDALKI YVRAVPNELE GSFDIFMKFL SNSFGMPVEL
481 QRALLSLLSE YISWTPKSQS DRGPTRIPPL MHKHLRVFIN LLLFSPHNGV KDLAYNLAVA
541 AMNSTGAFEN NPSEIGAWFL FLPCFEKIKL PLELQEAVQS MSSVVVSFLC DAVSTVGNNL
601 FKHWDIVRSS LSHLKGVSIG FSPLIICLLQ KCVRLLNSES KTSLPEKSAI SLYVCSTLKY
661 LLQTQVDSKL LSCLIQSVLS EVVDESKDSL CEWRPLRMLL CFSQSLSNEK PIILHSRRTT
721 GLPADSSFAE TLDEIKRLVR SISPDEIAGI VKAFSSALIC ATPESILQNF ASVMDVSWAF
781 YGTPFSFLQS ITFLEENFLG NLSKLSPDLF ASGSEFTGSG NLCEGTVDSE IDFSGHSSVT
841 EEIRSKMDNR DMESSAFSIF LKQAPFPVLL NAIMSMDISC LPEFPRISEL LLLKVSQPKS
901 GSIDSNIQLI LFWLFQIRSS YKVQPAPVLH QLSEICLRLM KNLFSQISEP ELVSGPSSNK
961 LPASFAKWKH QVAETVLCHP VVMALLESPL DCGTLPPVQN VEIFSETSLT MGRLVFSEID
1021 QHILNLLVST CEHFLFDEKP PNLWKEDLRK NKSIIAFKDL VERLLLEFRV KFELCVGSQS
1081 YVSLLQPAQL IHALLRFISP FKLFNIAHSM LSKIDEEGLT SPNSSIILSL GLGIAGGAFE
1141 MLVLYSHQPT AKRGVYDLLW ELEEKNYASN IIEKVYSMAC KFSTSLDLDS ADICLLKVCG
1201 GIFRGKHNQN YAVDPLVLKI SLIVGRTPED LIIHCINRAS ITRAKILFYL VESSPLHLLV
1261 FGHFFFSMLS KKQDDSALTD DQFIMLLPAV LSYLTSVIAK LEKPCNRCLD ITSVYSNILI
1321 NGFLQWPRFL ARCIFEEKHE EILLSTTEDM ETMFNASLIG KAVRMFQYHF SLTESPTKED
1381 DLFKVFNSMF PLSSTGKEML DYEIKEVDVQ SVDQILNVAI RVVAKVTVSR ICLFPEDSSM
1441 CHLKRAAGTC VKESSSKIGC NRAILSKPLL DALVNSWQCV VKKSDGSFKG NYEGKQDRCW
1501 SLCKSLENFI LRSILQFLES MCEELVQLDS LPFLDRLMKS VLLYRFEDSK TLKILREIFS
1561 LLSRGKYSYA PYIQRLIYHS RFTPTISSLS ISSSNTGELF RPVSSILNHL IILSPDSVRV
1621 KRCCLEAPKY AKQLEIVKIL RVLLSNCGKD SGMKELLSDL HFLLLCSYGA TLREIDLEIY
1681 KLMHDIKLIE AEQTLNVSET DYLWGKAALK IREGLSQDAS DVCQVDLVED VRQGLIKENL
1741 CVDPKICALT VLFFPYQRTT EKSENFYLYD DPINEVPVFS FNFQLIVLGY IEPVEFASLG
1801 LLAVAFVSMS SADLGMRKLG YETLQIFLDA LENCRKNKHV TGLRLLLMYV QNGVEEPWQR
1861 IPTVSAIFAA ETSMILLDPS HEHYVPINKL LKSSSTLKLR GIPLFHDFFW SSAVNFRSQR
1921 FWELRLVYLG LKSDDDVQIY IKNSILETVI SFSSSPLADD ETKRLILQVV RKSVKFHKIA
1981 RHLVENCGLF SWCSSFISNF TTKPIGDKDL HLVVVLEIIT DVLASRNITE WLQRFGLEGL
2041 MEISSRLYKL LGGGLVSVQE NGTSVDLILQ ILSATLKISQ KRNMYQPHFT ITIEGIFQLF
2101 EGVANFGSPQ VEASAESGLI TILMSTPPVD ILCMDVDKLR RFLLWGTSTA LKSDFKKGSK
2161 PSESHEDTKI LIEGPQEETM VAKFLRWLSA SVILGKSYSK ASDSDPTFLS KTKPETLLTS
2221 LEYFKKRNLE DSMQNSEHII GEVIVHLQQF LSTNYMFLLP SVVFALSLML LHNDLGTGES
2281 DGDYKLIKSL CSKISSPPEA IPGWRWSYYQ AWRDLSSEQA TDLDKINELH ACQHLLLIFS
2341 AMLGETPQES QQVLLRKSFD MSHVFEWERS LVET
//