LOCUS AEE85239.1 687 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana fimbrin 1 protein.
ACCESSION CP002687-4827
PROTEIN_ID AEE85239.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="FIM1"
/locus_tag="AT4G26700"
/gene_synonym="ARABIDOPSIS THALIANA FIMBRIN 1"
/gene_synonym="ATFIM1"
/gene_synonym="F10M23.40"
/gene_synonym="F10M23_40"
/gene_synonym="fimbrin 1"
/gene_synonym="FIMBRIN-LIKE PROTEIN"
/inference="Similar to RNA sequence,
EST:INSD:EG504873.1,INSD:AV783553.1,INSD:BP838547.1,
INSD:DR379887.1,INSD:BP663269.1,INSD:Z29762.1,
INSD:ES001873.1,INSD:BP839502.1,INSD:CB258947.1,
INSD:BP632141.1,INSD:BP560864.1,INSD:DR360551.1,
INSD:Z29761.1,INSD:EL219204.1,INSD:BP646447.1,
INSD:CB258915.1,INSD:BP637109.1,INSD:BP636704.1,
INSD:ES175454.1,INSD:EG504874.1,INSD:EH893681.1,
INSD:BX835311.1"
/inference="Similar to RNA sequence,
mRNA:INSD:U66424.1,INSD:AF042668.1"
/note="fimbrin 1 (FIM1); FUNCTIONS IN: actin binding;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Actinin-type, actin-binding, conserved
site (InterPro:IPR001589), Calponin-homology
(InterPro:IPR016146), Calponin-like actin-binding
(InterPro:IPR001715); BEST Arabidopsis thaliana protein
match is: Actin binding Calponin homology (CH)
domain-containing protein (TAIR:AT5G55400.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink)."
/db_xref="TAIR:AT4G26700"
/db_xref="Araport:AT4G26700"
intron_pos 30:0 (1/13)
intron_pos 87:0 (2/13)
intron_pos 167:2 (3/13)
intron_pos 225:0 (4/13)
intron_pos 238:0 (5/13)
intron_pos 261:0 (6/13)
intron_pos 300:0 (7/13)
intron_pos 370:2 (8/13)
intron_pos 421:2 (9/13)
intron_pos 488:1 (10/13)
intron_pos 541:0 (11/13)
intron_pos 573:1 (12/13)
intron_pos 604:0 (13/13)
BEGIN
1 MSGYVGVVVS DPWLQSQFTQ VELRTLNSKY VSVKNQNGKV TIEDLPPLFA KLKALSATFK
61 EDEIKGMLGE LGSDTSTDVS FEEFLKIYLN LLSKAAEKSG GHHKNSSSFL KACTTTLLHT
121 IYQSEKGPFV QHINRYLGDD PFLKQFLPLD PHSNQLYELV KDGVLLCKLI NVAVPGTIDE
181 RAINTKRVLN PWERNENHTL CLNSAKAVGC SVVNIGTQDL AEGRPHLVLG LISQLIKIQV
241 LADLNLKKTP QLVELLEDSD DVEELLRLPP EKVLLKWMNF HLKKGGYKKT VSNFSADLKD
301 AQAYAFLLNV LAPEHCDPAT LDAKDPLERA ELVLSHAERM NCKRYLTAEE IVEGSSTLNL
361 AFVAQIFHER NGLNKDGKYA FAEMMTEDVE TCRDERCYRL WINSLGIDSY VNNVFEDVRN
421 GWILLEVLDK VSPSSVNWKH ASKPPIKMPF RKVENCNQVI KIGKQLKFSL VNVAGNDIVQ
481 GNKKLILGLL WQLMRFHMLQ LLKSLRSRTL GKEMTDADIL SWANRKVRTM GRKLQIESFK
541 DKSLSSGLFF LNLLWAVEPR VVNWNLVTKG ETDDEKRLNA TYIVSVARKL GCSVFLLPED
601 IVEVNQKMIL ILTASIMYWS LQRHSRESSD SSSTQSTTTT CTSTASSPAP SVTEEEEVSS
661 LSGEVTSLAV GDAVSEITTV SEEASIE
//