LOCUS AEE85238.1 759 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana PLC-like phosphodiesterase family
protein protein.
ACCESSION CP002687-4825
PROTEIN_ID AEE85238.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="SHV3"
/locus_tag="AT4G26690"
/gene_synonym="F10M23.30"
/gene_synonym="F10M23_30"
/gene_synonym="GDPDL3"
/gene_synonym="Glycerophosphodiester phosphodiesterase
(GDPD) like 3"
/gene_synonym="GLYCEROPHOSPHODIESTERASE-LIKE 2"
/gene_synonym="GPDL2"
/gene_synonym="MRH5"
/gene_synonym="MUTANT ROOT HAIR 5"
/gene_synonym="SHAVEN 3"
/inference="Similar to RNA sequence,
EST:INSD:BP602897.1,INSD:EL146968.1,INSD:AV551962.1,
INSD:CB252311.1,INSD:T42321.1,INSD:EL328512.1,
INSD:EH825904.1,INSD:EG482467.1,INSD:BP621561.1,
INSD:EL293268.1,INSD:DR363411.1,INSD:BP810336.1,
INSD:AV547459.1,INSD:BP602014.1,INSD:BX841084.1,
INSD:EL154905.1,INSD:AV547413.1,INSD:EL246710.1,
INSD:BP810815.1,INSD:EL065729.1,INSD:AV540940.1,
INSD:AA720169.1,INSD:AV565080.1,INSD:EL057411.1,
INSD:AV545484.1,INSD:ES052478.1,INSD:EH899411.1,
INSD:BE526087.1,INSD:DR363410.1,INSD:AV564664.1,
INSD:ES083820.1,INSD:EL148476.1,INSD:EL091325.1,
INSD:R65259.1,INSD:CB252127.1,INSD:CB261011.1,
INSD:AV826483.2,INSD:Z34229.1,INSD:BP806177.1,
INSD:BX836283.1,INSD:EL251972.1,INSD:BP806038.1,
INSD:BP602792.1,INSD:EL224680.1,INSD:EL040219.1,
INSD:EL312868.1,INSD:DR358882.1,INSD:ES013075.1,
INSD:ES179130.1,INSD:ES155139.1,INSD:EL319628.1,
INSD:BX840349.1,INSD:AA395033.1,INSD:AV552428.1,
INSD:DR363412.1,INSD:DR363407.1,INSD:BP618719.1,
INSD:ES176272.1,INSD:BP617348.1,INSD:EG482465.1,
INSD:AV439841.1,INSD:BP809559.1,INSD:EH917756.1,
INSD:EH855488.1,INSD:BX840074.1,INSD:AI994396.1,
INSD:EL237679.1,INSD:CD530928.1,INSD:EL003048.1,
INSD:EG489964.1,INSD:EH845554.1,INSD:AV545572.1,
INSD:EH839196.1,INSD:AV529976.1,INSD:AV538943.1,
INSD:EH835070.1,INSD:EL101650.1,INSD:BX841107.1,
INSD:BP601195.1,INSD:AV528905.1,INSD:AV554223.1,
INSD:AV795145.1,INSD:EL108652.1,INSD:EL207879.1,
INSD:CB259397.1,INSD:EL095072.1,INSD:BP619610.1,
INSD:DR359567.1,INSD:AV529955.1,INSD:AV548490.1,
INSD:AV552070.1,INSD:EL050082.1,INSD:ES165099.1,
INSD:BX836034.1,INSD:EH939541.1,INSD:EH991114.1,
INSD:EL002574.1,INSD:BP598300.1,INSD:EH918556.1,
INSD:R64793.1,INSD:BP786614.1,INSD:DR363406.1,
INSD:EH890504.1,INSD:ES041148.1,INSD:BP588348.1,
INSD:BP607756.1,INSD:CK120913.1,INSD:DR363409.1,
INSD:EL120640.1,INSD:BP805339.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY056280.1"
/note="SHAVEN 3 (SHV3); FUNCTIONS IN:
glycerophosphodiester phosphodiesterase activity, kinase
activity; INVOLVED IN: in 8 processes; LOCATED IN:
anchored to plasma membrane, plasma membrane, anchored to
membrane, plant-type cell wall; EXPRESSED IN: 28 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM
beta/alpha-barrel domain (InterPro:IPR017946),
Glycerophosphoryl diester phosphodiesterase
(InterPro:IPR004129); BEST Arabidopsis thaliana protein
match is: SHV3-like 2 (TAIR:AT1G66970.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G26690"
/db_xref="Araport:AT4G26690"
intron_pos 41:1 (1/7)
intron_pos 139:1 (2/7)
intron_pos 345:1 (3/7)
intron_pos 358:1 (4/7)
intron_pos 453:1 (5/7)
intron_pos 501:0 (6/7)
intron_pos 662:1 (7/7)
BEGIN
1 MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS
61 YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS SSIEAVYPTR QKSYPVNGVP
121 TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA
181 FYAQHNLSMS SFLVAASKTV LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT
241 TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301 ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF
361 LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD GTPFCLSSID LGNSTTVSLT
421 AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS
481 DFLSLAKNST SLSGVLISVE NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN
541 SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601 NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY
661 KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP VFTDADVTEP PLPPVTAKAP
721 TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
//