LOCUS AEE85229.1 763 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DEK domain-containing chromatin associated
protein protein.
ACCESSION CP002687-4811
PROTEIN_ID AEE85229.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G26630"
/gene_synonym="DEK-domain containing protein 3"
/gene_synonym="DEK3"
/gene_synonym="T15N24.80"
/gene_synonym="T15N24_80"
/inference="Similar to RNA sequence,
EST:INSD:BP808546.1,INSD:AV791504.1,INSD:EL297242.1,
INSD:EL329878.1,INSD:EH986993.1,INSD:ES136382.1,
INSD:ES209051.1,INSD:DR270526.1,INSD:ES120829.1,
INSD:CD532612.1,INSD:ES049257.1,INSD:AI994758.1,
INSD:AV787004.1,INSD:EG528301.1,INSD:DR270527.1,
INSD:EL988940.1,INSD:ES201335.1,INSD:EL067480.1,
INSD:ES103101.1,INSD:ES057033.1,INSD:AU230263.1,
INSD:EL991052.1,INSD:ES047826.1,INSD:ES164823.1,
INSD:ES183834.1,INSD:ES124123.1,INSD:EG520756.1,
INSD:EH976387.1,INSD:ES021037.1,INSD:EL016193.1,
INSD:AV801584.1,INSD:BP662074.1,INSD:ES055362.1,
INSD:ES008386.1,INSD:EH855705.1,INSD:ES200456.1,
INSD:ES119240.1,INSD:EL205261.1,INSD:ES193845.1,
INSD:ES164655.1,INSD:ES151268.1,INSD:ES127824.1,
INSD:EL969326.1,INSD:EH893075.1,INSD:ES025957.1,
INSD:ES136418.1,INSD:EL093602.1,INSD:ES167005.1,
INSD:ES103501.1,INSD:BP612411.1,INSD:ES018041.1,
INSD:AV783822.1,INSD:EL008598.1,INSD:EH941407.1,
INSD:AV828492.1,INSD:ES144111.1,INSD:ES125611.1,
INSD:ES011149.1,INSD:ES051277.1,INSD:ES041768.1,
INSD:DR378807.1,INSD:AV822943.1,INSD:AV785771.1,
INSD:ES168722.1,INSD:EL088812.1,INSD:EG430930.1,
INSD:ES148289.1,INSD:EL033303.1,INSD:ES142962.1,
INSD:ES001935.1,INSD:EH947079.1,INSD:EH845441.1,
INSD:EL268831.1,INSD:N38510.1,INSD:ES024772.1,
INSD:BP562735.2,INSD:ES028622.1,INSD:EG440628.1,
INSD:EH909684.1,INSD:EL986682.1,INSD:ES195974.1,
INSD:EL234169.1,INSD:ES174375.1,INSD:EL295049.1,
INSD:CD529634.1,INSD:EG426042.1,INSD:EG525342.1,
INSD:W43030.1,INSD:BP602340.1,INSD:EH970761.1,
INSD:ES094198.1,INSD:EL972466.1,INSD:EL185812.1,
INSD:ES098289.1,INSD:EL039036.1,INSD:EH861487.1,
INSD:ES140418.1,INSD:ES168117.1,INSD:EH907627.1,
INSD:ES048689.1,INSD:EG440470.1,INSD:ES027755.1,
INSD:ES151987.1,INSD:ES098061.1,INSD:ES206512.1,
INSD:EG525126.1,INSD:ES043640.1,INSD:ES201557.1,
INSD:EL985465.1,INSD:EH851438.1,INSD:EH946877.1,
INSD:EG527940.1,INSD:AV554087.1,INSD:BP806530.1,
INSD:ES025554.1,INSD:EL171520.1,INSD:EG525137.1,
INSD:EL997323.1,INSD:ES158383.1,INSD:EH920267.1,
INSD:EG426053.1,INSD:EL073054.1,INSD:EL049698.1,
INSD:ES202729.1,INSD:EL132827.1,INSD:ES140129.1,
INSD:BP784646.1,INSD:EH850589.1,INSD:ES038988.1,
INSD:EG520758.1,INSD:EG525343.1,INSD:EH796330.1,
INSD:EG528300.1,INSD:ES017290.1,INSD:EH886555.1,
INSD:EH816106.1,INSD:EL124036.1,INSD:EL192310.1,
INSD:EG440469.1,INSD:EL165405.1,INSD:AI996874.1,
INSD:EL093036.1,INSD:DR270528.1,INSD:ES101495.1,
INSD:ES070561.1,INSD:EG527939.1,INSD:ES185552.1,
INSD:EL263473.1,INSD:EL163341.1,INSD:EL313976.1,
INSD:ES179115.1,INSD:ES097491.1,INSD:ES186026.1,
INSD:ES031293.1,INSD:ES008981.1,INSD:AI996256.1,
INSD:ES111539.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK227843.1,INSD:AY093124.1,INSD:BT008491.1"
/note="DEK domain-containing chromatin associated protein;
CONTAINS InterPro DOMAIN/s: DEK, C-terminal
(InterPro:IPR014876); BEST Arabidopsis thaliana protein
match is: DEK domain-containing chromatin associated
protein (TAIR:AT5G55660.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT4G26630"
/db_xref="Araport:AT4G26630"
intron_pos 346:0 (1/10)
intron_pos 357:1 (2/10)
intron_pos 385:0 (3/10)
intron_pos 405:0 (4/10)
intron_pos 442:0 (5/10)
intron_pos 473:0 (6/10)
intron_pos 501:0 (7/10)
intron_pos 667:1 (8/10)
intron_pos 698:0 (9/10)
intron_pos 708:1 (10/10)
BEGIN
1 MGEDTKATIE PTANKTTSLE KPSEAMAGKE NAGGKETQEL AKDEDMAEPD NMEIDAQIKK
61 DDEKAETEDK ESEVKKNEDN AETQKMEEKV EVTKDEGQAE ATNMDEDADG KKEQTDDGVS
121 VEDTVMKENV ESKDNNYAKD DEKETKETDI TEADHKKAGK EDIQHEADKA NGTKDGNTGD
181 IKEEGTLVDE DKGTDMDEKV ENGDENKQVE NVEGKEKEDK EENKTKEVEA AKAEVDESKV
241 EDEKEGSEDE NDNEKVESKD AKEDEKEETN DDKEDEKEES KGSKKRGKGT SSGGKVREKN
301 KTEEVKKDAE PRTPFSDRPV RERKSVERLV ALIDKDSSKE FRVEKGRGAY LKDIPNVANK
361 VMRKRSDETL KLLHPILFGG RRGKAAQIKT NILGFSGFVW HGDEKKAKEK VKEKLEKCTK
421 EKLWEFCDVL DIHITKATTK KEDIITKLFE FLEKPHVTGD VTGDTTVSEK EKSSKGAKRK
481 RTPKKTSPTA GSSSSKRSAK SQKKSEEATK VVKKSLAHSD DESEEEKEEE EKQEEEKAEE
541 KEEKKEEENE NGIPDKSEDE APQPSESEEK DESEEHSEEE TTKKKRGSRL SAGKKESAGR
601 ARNKKAVVAA KSSPPEKITQ KRSSAKRKKT DDDSDTSPKA SSKRKKSENP IKASPAPSKS
661 ASKEKPVKRA GKGKDKPSDK VLKNAIVEIL KRVDFSTATF TDILKELAKE FTEDLTPRKS
721 SIKMIIQEEL TKLADEEEEE EKKEEDSEKE EAGGSGGGEE VKA
//