LOCUS AEE85193.1 356 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002687-4752
PROTEIN_ID AEE85193.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G26400"
/gene_synonym="M3E9.170"
/gene_synonym="M3E9_170"
/inference="Similar to RNA sequence,
EST:INSD:BP857017.1,INSD:BP800294.1,INSD:EL007319.1,
INSD:ES069493.1,INSD:ES111422.1,INSD:ES202281.1,
INSD:EL081263.1,INSD:BP575669.1,INSD:BP576081.1,
INSD:BE529500.1,INSD:BP842498.2,INSD:ES055438.1,
INSD:BP633409.1,INSD:EL008168.1,INSD:EH881978.1,
INSD:BU635070.1,INSD:BP802263.1,INSD:BP671070.1,
INSD:BP582345.1,INSD:BP636574.1,INSD:EH986577.1,
INSD:DR273473.1,INSD:DR363962.1,INSD:AV543194.1,
INSD:Z33838.1,INSD:BP625983.1,INSD:BP571595.1,
INSD:BP656458.1,INSD:DR273475.1,INSD:BP576380.1,
INSD:Z34755.1,INSD:EL067436.1,INSD:DR273474.1,
INSD:EL138208.1,INSD:BE530862.1,INSD:ES043630.1,
INSD:BP584946.1,INSD:BP577419.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT000305.1,INSD:BX828235.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; INVOLVED IN: response to chitin; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841),
Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST
Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast
hits to 10426 proteins in 293 species: Archae - 0;
Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209;
Viruses - 70; Other Eukaryotes - 1489 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G26400"
/db_xref="Araport:AT4G26400"
BEGIN
1 MSARYWCHMC SQMVNPVIGA EIKCPFCQSG FVEEMSREIN GGSSSSLREV QDPEIDFGTD
61 RALSLWGPIL LGMMSNPRRR RRFRRTEFGV DNDEVNVSDD VDGNDSVDID RHHHRRHRHR
121 QQGREIDLDR EFESILRRRR RSSATILQLL QGIRAGIASE YESSDRDLLN QSAVVQGSTS
181 LNQNRNNTSL SAIGDYFVGS SLDHLLEHLA DNDSIRHGSL PARKEVVDNL PTVKISESLQ
241 CSICLDDFDK GSEAKEMPCK HKFHIRCIVP WLELHSSCPV CRYELPPDDE TKVNPVRPRT
301 RTLEINVSNE NVEDDARNSN VSERRFSFPW PFSGLFSSSS SSSASASGSS HLGENS
//