LOCUS AEE85189.1 301 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana antitermination NusB domain-containing
protein protein.
ACCESSION CP002687-4747
PROTEIN_ID AEE85189.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G26370"
/gene_synonym="T25K17.4"
/inference="Similar to RNA sequence,
EST:INSD:DR352266.1,INSD:DR352249.1,INSD:EL232469.1,
INSD:BP868833.1,INSD:EL005016.1,INSD:DR352262.1,
INSD:DR352267.1,INSD:ES064762.1,INSD:CB262865.1,
INSD:AV566369.1,INSD:EL235895.1,INSD:DR352260.1,
INSD:EH886534.1,INSD:EL061674.1,INSD:DR352254.1,
INSD:BP669726.1,INSD:EL094558.1,INSD:EL135975.1,
INSD:DR352245.1,INSD:DR352252.1,INSD:AV562390.1,
INSD:DR352256.1,INSD:AV789982.1,INSD:DR352255.1,
INSD:DR352268.1,INSD:DR352247.1,INSD:EH946260.1,
INSD:EH969061.1,INSD:ES085326.1,INSD:AV832068.1,
INSD:ES113709.1,INSD:EL071172.1,INSD:ES170956.1,
INSD:EH931832.1,INSD:DR352246.1,INSD:EL239231.1,
INSD:AV531045.1,INSD:DR352257.1,INSD:EL002509.1,
INSD:DR352265.1,INSD:EL990271.1,INSD:EH811750.1,
INSD:EL172460.1,INSD:BP851576.1,INSD:DR352250.1,
INSD:DR352258.1,INSD:DR352251.1,INSD:AV519480.1,
INSD:AV819032.1,INSD:ES177258.1,INSD:EH852320.1,
INSD:DR352261.1,INSD:BP793000.1,INSD:DR275787.1,
INSD:EL128637.1,INSD:DR352253.1,INSD:BP818224.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY089205.1,INSD:BT008707.1,INSD:AY054564.1"
/note="antitermination NusB domain-containing protein;
FUNCTIONS IN: RNA binding; INVOLVED IN: regulation of
transcription, DNA-dependent; LOCATED IN: chloroplast;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NusB/RsmB/TIM44
(InterPro:IPR006027); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G26370"
/db_xref="Araport:AT4G26370"
intron_pos 105:2 (1/6)
intron_pos 131:1 (2/6)
intron_pos 176:1 (3/6)
intron_pos 194:2 (4/6)
intron_pos 224:0 (5/6)
intron_pos 257:0 (6/6)
BEGIN
1 MEGTFSPLCL RSSSNLCYFS SNVSPDSHRS IGFTLVDSLR PTNLVSLRTG NKRSSSSSLR
61 LFLSPTRSAL RTPTISAEEV KDVPMPKIDK SGRLSSPRAA RELALVILYA ACLEGSDPIR
121 LFEKRINARR EPGYEFDKSS LLEYNHMSFG GPPVKTETKE EEDELVRHDE KESKIEAEVL
181 SAPPKLVYSK LVLRFAKKLL AAVVDKWDSH VVIIEKISPP DWKSAPAGRI LEFSILHLAM
241 SEVAVLETRH PIVINEAVDL AKRFCDGSAP RIINGCLRTF VKDRATTSTP QALELKQEVS
301 V
//