LOCUS AEE85183.1 258 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana elongation factor P (EF-P) family
protein protein.
ACCESSION CP002687-4740
PROTEIN_ID AEE85183.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G26310"
/gene_synonym="T25K17.120"
/gene_synonym="T25K17_120"
/inference="Similar to RNA sequence,
EST:INSD:F20046.1,INSD:BP625322.1,INSD:ES175667.1,
INSD:EL151495.1,INSD:ES144664.1,INSD:BP628111.1,
INSD:ES006782.1,INSD:EL329614.1,INSD:EL252060.1,
INSD:BP561478.2,INSD:CF773042.1,INSD:BP855012.1,
INSD:BP586331.1,INSD:AV792396.1,INSD:BP795530.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY054472.1,INSD:AY093290.1,INSD:BX829096.1"
/note="elongation factor P (EF-P) family protein;
FUNCTIONS IN: translation elongation factor activity;
INVOLVED IN: translational elongation; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Translation elongation factor
P/YeiP, conserved site (InterPro:IPR013852), Nucleic
acid-binding, OB-fold (InterPro:IPR012340), Translation
elongation factor, KOW-like (InterPro:IPR013185),
Translation protein SH3-like, subgroup
(InterPro:IPR014722), Elongation factor P, C-terminal
(InterPro:IPR015365), Translation protein SH3-like
(InterPro:IPR008991), Nucleic acid-binding, OB-fold-like
(InterPro:IPR016027), Translation elongation factor
P/YeiP, central (InterPro:IPR001059); BEST Arabidopsis
thaliana protein match is: elongation factor P (EF-P)
family protein (TAIR:AT3G08740.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G26310"
/db_xref="Araport:AT4G26310"
intron_pos 78:0 (1/10)
intron_pos 88:1 (2/10)
intron_pos 93:0 (3/10)
intron_pos 110:0 (4/10)
intron_pos 133:1 (5/10)
intron_pos 155:2 (6/10)
intron_pos 178:1 (7/10)
intron_pos 219:2 (8/10)
intron_pos 233:0 (9/10)
intron_pos 255:2 (10/10)
BEGIN
1 MRGLHHFKRI SISRSLFSFS NATSPGAVTT RRSLYSLSRS LLSSTPYAAG GCCRETPPLH
61 SPWSALQRRG VKVNAIQLRA GNVIERTGRT FRVVEAEHKQ QGRGGASIQV ELRDVDTGNK
121 LNLRFGSEES VEKVFVEEKS FTCLYAEGDT AYLIEPNTFE QVEVPLDIFG KAAVYLKEEM
181 KVQLQLYDGR ALSASIPKHI TCTVVETQLP MKGLTSAPRY KRALLDNGST IQVPSYLEAG
241 EKIVINTEDD SFVKRDNK
//