LOCUS AEE85138.1 635 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana phosphatidylserine decarboxylase 3 protein.
ACCESSION CP002687-4672
PROTEIN_ID AEE85138.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PSD3"
/locus_tag="AT4G25970"
/gene_synonym="F20B18.80"
/gene_synonym="F20B18_80"
/gene_synonym="phosphatidylserine decarboxylase 3"
/inference="Similar to RNA sequence,
EST:INSD:DR316677.1,INSD:ES067145.1,INSD:BP808512.1,
INSD:ES062711.1,INSD:ES193369.1,INSD:EL209613.1,
INSD:BP573834.1,INSD:ES159640.1,INSD:AA650898.1,
INSD:EL138324.1,INSD:T43958.1,INSD:BP624746.1,
INSD:DR259445.1,INSD:ES083937.1,INSD:BP594228.1,
INSD:BP640794.1,INSD:BP616901.1,INSD:ES054653.1,
INSD:EH866363.1,INSD:ES128928.1,INSD:AV527283.1,
INSD:AA395305.1,INSD:ES162199.1,INSD:BP580671.1,
INSD:EL244944.1,INSD:BP571736.1,INSD:ES155033.1,
INSD:BP614584.1,INSD:EH847020.1,INSD:EH947294.1,
INSD:BP797492.1,INSD:EL091448.1,INSD:DR259449.1,
INSD:BP576750.1,INSD:AV824176.1,INSD:ES065081.1,
INSD:DR259446.1,INSD:DR259448.1,INSD:AV785355.1,
INSD:DR259447.1,INSD:AV552787.1,INSD:BP601592.1,
INSD:EL994578.1,INSD:ES209045.1,INSD:EL098509.1,
INSD:EL161022.1,INSD:ES073947.1,INSD:EL047943.1,
INSD:BP797705.1,INSD:BP582957.1,INSD:BP580618.1,
INSD:DR373741.1,INSD:AI997096.1,INSD:EL153460.1,
INSD:BP581147.1,INSD:DR259450.1"
/inference="Similar to RNA sequence, mRNA:INSD:EF203901.1"
/note="phosphatidylserine decarboxylase 3 (PSD3);
FUNCTIONS IN: phosphatidylserine decarboxylase activity;
INVOLVED IN: N-terminal protein myristoylation,
phospholipid biosynthetic process; LOCATED IN: endoplasmic
reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
EF-Hand 1, calcium-binding site (InterPro:IPR018247), C2
calcium/lipid-binding domain, CaLB (InterPro:IPR008973),
EF-hand-like domain (InterPro:IPR011992), Calcium-binding
EF-hand (InterPro:IPR002048), Phosphatidylserine
decarboxylase-related (InterPro:IPR003817), EF-HAND 2
(InterPro:IPR018249), Phosphatidylserine decarboxylase
(InterPro:IPR005221); BEST Arabidopsis thaliana protein
match is: phosphatidylserine decarboxylase 2
(TAIR:AT5G57190.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G25970"
/db_xref="Araport:AT4G25970"
intron_pos 63:0 (1/20)
intron_pos 89:2 (2/20)
intron_pos 98:0 (3/20)
intron_pos 118:0 (4/20)
intron_pos 141:0 (5/20)
intron_pos 171:0 (6/20)
intron_pos 188:0 (7/20)
intron_pos 216:0 (8/20)
intron_pos 246:2 (9/20)
intron_pos 296:2 (10/20)
intron_pos 325:0 (11/20)
intron_pos 362:1 (12/20)
intron_pos 396:0 (13/20)
intron_pos 412:0 (14/20)
intron_pos 461:0 (15/20)
intron_pos 493:0 (16/20)
intron_pos 518:0 (17/20)
intron_pos 549:0 (18/20)
intron_pos 578:0 (19/20)
intron_pos 595:0 (20/20)
BEGIN
1 MGNGNSTETK ESRRSKMRKK IQNFRSRRRL SRPGSGSVSG LASQRSVSAD DFAGIALLTL
61 IGAEMKFKDK WLACVSFGEQ TFRSEISDST EKPIWNSEKK LLLEKNGPSL ARISVFETNR
121 LLKNNIVGYC ELDLLDFVVQ EPDSTCKSFD LLDPASSNVV GSMFVSCSVE DPVETETCFA
181 KRILSIVDYD EDGKLSFSEF SDLMNAFGNV VAANKKEELF KAADLNGDGV VTIDELAALL
241 AVQQEQEPII NSCPVCGEAL QLDKLNAMIH MTLCFDEGTG NQMTGGFLTD RQASYGWMFK
301 LSEWTHLSTY DVGLNTGSSA SHIVVIDRKT KRLVEELIDS KIVMSMRAIY QSKIGLRLMD
361 QGAKEILQNL SEKQGKKMNS VESAQNIPSF LEFFKDQINM AEVKYPLDHF KTFNEFFVRE
421 LKPGARPIAC MDQDDVAVSA ADCRLMAFQS VDDSTRFWIK GRKFSIKGLL GNDVQSDAFL
481 DGSLVIFRLA PQDYHRFHSP VSGVIEKFVN VSGSLYTVNP IAVNSKYCNV FTENKRTIVI
541 ISTAEFGKVA FVAIGATMVG SISFVRQEGD HVKKGDELGY FSFGGSTVIC VFEKDSIKID
601 EDLLANSARS LETLVTVGMQ LGVSFPKLEN CVLEP
//